Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR150C
Length:
864
Number of sequences:
5887
Description:
YGR150C CCM1 SGDID:S000003382, Chr VII from 793053-790459, Genome Release 64-1-1, reverse complement, Verified ORF, "Mitochondrial 15s rRNA-binding protein; required for intron removal of COB and COX1 pre-mRNAs; contains pentatricopeptide repeat (PPR) motifs; mutant is respiratory deficient and has defective plasma membrane electron transport"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P48237    864   CCM1_YEAST Mitochondrial group I intron splic...8640     1792     100     100GO:0005739; C:mitochondrion; IDA:SGD.
GO:0019843; F:rRNA binding; IDA:SGD.
GO:0000002; P:mitochondrial genome maintenance; IMP:SGD.::GO:0000963; P:mitochondrial RNA processing; IMP:SGD.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0016072; P:rRNA metabolic process; IMP:SGD.
2B3LI79    864   CCM1_YEAS1 Mitochondrial group I intron splic...8640     1789     99     99GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
3C7GQ59    864   CCM1_YEAS2 Mitochondrial group I intron splic...8640     1787     99     99GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
4A6ZUG2    864   CCM1_YEAS7 Mitochondrial group I intron splic...8640     1785     99     99GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
5C8Z944    864   CCM1_YEAS8 Mitochondrial group I intron splic...8640     1782     99     99GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
6C5E042    839   CCM1_ZYGRC Mitochondrial group I intron splic...8200     627     42     63GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
7A7TMW6    867   CCM1_VANPO Mitochondrial group I intron splic...8240     570     39     61GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
8C5DHU5    871   CCM1_LACTC Mitochondrial group I intron splic...8183e-174     533     37     57GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
9Q6FVC6    830   CCM1_CANGA Mitochondrial group I intron splic...8107e-159     492     37     56GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
10Q6CNQ2    853   CCM1_KLULA Mitochondrial group I intron splic...8391e-149     468     36     55GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
11Q752U3    855   CCM1_ASHGO Mitochondrial group I intron splic...8463e-144     454     35     52GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
12B9WJ16    765   CCM1_CANDC Mitochondrial group I intron splic...5377e-31     134     26     42GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
13C4YSG0    770   CCM1_CANAW Mitochondrial group I intron splic...5424e-28     125     25     42GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
14Q5A8W9    768   CCM1_CANAL Mitochondrial group I intron splic...5385e-28     124     25     42GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
15Q6BZ28    787   CCM1_DEBHA Mitochondrial group I intron splic...5274e-23     109     24     42GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
16C4Y2K4    750   CCM1_CLAL4 Mitochondrial group I intron splic...7105e-23     108     22     39GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
17A5DA73    644   CCM1_PICGU Mitochondrial group I intron splic...7080.000000000000001     85.1     22     40GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
18C5M5D9    753   CCM1_CANTT Mitochondrial group I intron splic...990.000000006     63.5     31     59GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
19A3LRH4    775   CCM1_PICST Mitochondrial group I intron splic...890.0000002     58.2     35     57GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
20C4R5P7    725   CCM1_PICPG Mitochondrial group I intron splic...1240.0000000004     67.4     28     59GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
21Q6CHP9    773   CCM1_YARLI Mitochondrial group I intron splic...2900.0000000002     68.2     25     41GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
22O42955    687   CCM1_SCHPO Pentatricopeptide repeat-containin...950.00000002     62     34     56GO:0005739; C:mitochondrion; IDA:PomBase.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0070317; P:negative regulation of G0 to G1 transition; IMP:PomBase.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
23B6K1V7    677   CCM1_SCHJY Mitochondrial group I intron splic...770.00000003     61.2     40     55GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
24Q9ZU27    650   PPR76_ARATH Pentatricopeptide repeat-containi...2360.0000003     57.8     24     47GO:0005739; C:mitochondrion; IDA:TAIR.
GO:0005488; F:binding; IEA:InterPro.
GO:0009737; P:response to abscisic acid stimulus; IMP:TAIR.::GO:0008380; P:RNA splicing; IMP:TAIR.
25Q9MAG8    471   PPR79_ARATH Putative pentatricopeptide repeat...2200.000007     53.1     22     37
GO:0005488; F:binding; IEA:InterPro.
GO:0009790; P:embryo development; IMP:TAIR.::GO:0010154; P:fruit development; IMP:TAIR.::GO:0048364; P:root development; IMP:TAIR.::GO:0048367; P:shoot development; IMP:TAIR.
26Q9S7R4    482   PP125_ARATH Pentatricopeptide repeat-containi...990.056     40.4     28     45GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0008380; P:RNA splicing; IGI:TAIR.
27Q9SSF9    855   PP123_ARATH Pentatricopeptide repeat-containi...1060.019     42.4     23     47
GO:0005488; F:binding; IEA:InterPro.
28Q9S7Q2    862   PP124_ARATH Pentatricopeptide repeat-containi...820.25     38.9     29     49GO:0009507; C:chloroplast; IDA:TAIR.::GO:0009508; C:plastid chromosome; IDA:TAIR.
GO:0005488; F:binding; IEA:InterPro.
GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:TAIR.::GO:0042793; P:transcription from plastid promoter; IMP:TAIR.
29Q9M907    871   PP217_ARATH Pentatricopeptide repeat-containi...1716.3     34.3     19     38
GO:0005488; F:binding; IEA:InterPro.
30Q8GYL7    852   PP361_ARATH Pentatricopeptide repeat-containi...1620.13     39.7     24     43GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
31Q9FLD8    678   PP408_ARATH Pentatricopeptide repeat-containi...2840.002     45.1     21     42GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
records
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