UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YGR129W

Length:

215

Number of sequences:

5887

Description:

YGR129W SYF2 SGDID:S000003361, Chr VII from 750400-751047, Genome Release 64-1-1, Verified ORF, "Member of the NineTeen Complex (NTC) that contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs; isy1 syf2 cells have defective spindles activiating cell cycle arrest"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P53277	215	SYF2_YEAST Pre-mRNA-splicing factor SYF2 OS=S...	215	3e-155	436	100	100	GO:0000974; C:Prp19 complex; IDA:SGD.::GO:0071006; C:U2-type catalytic step 1 spliceosome; IDA:SGD.::GO:0071007; C:U2-type catalytic step 2 spliceosome; IDA:SGD.::GO:0071008; C:U2-type post-mRNA release spliceosomal complex; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD.
									GO:0005515; F:protein binding; IPI:IntAct.
									GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
2	Q6CPI4	221	SYF2_KLULA Pre-mRNA-splicing factor SYF2 OS=1...	212	6e-19	85.9	32	52	GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
3	Q753K4	192	SYF2_ASHGO Pre-mRNA-splicing factor SYF2 OS=Y...	214	1e-17	81.6	32	50	GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
4	Q6FPZ6	200	SYF2_CANGA Pre-mRNA-splicing factor SYF2 OS=N...	210	2e-17	80.9	32	52	GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
5	Q6BVE0	231	SYF2_DEBHA Pre-mRNA-splicing factor SYF2 OS=0...	158	0.00002	47.8	26	53	GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
6	Q7RZK5	339	SYF2_NEUCR Pre-mRNA-splicing factor syf-2 OS=...	163	0.017	39.3	25	47	GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
7	Q5BC69	297	SYF2_EMENI Pre-mRNA-splicing factor syf2 OS=1...	177	0.052	37.7	24	44	GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
8	Q4WPM6	300	SYF2_ASPFU Pre-mRNA-splicing factor syf2 OS=A...	180	0.23	35.4	25	43	GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
9	Q521C0	291	SYF2_MAGO7 Pre-mRNA-splicing factor SYF2 OS=b...	179	0.35	35	26	45	GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
10	P33640	320	RLUD_PSEAE Ribosomal large subunit pseudourid...	50	1.9	32.7	40	56
									GO:0009982; F:pseudouridine synthase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
									GO:0001522; P:pseudouridine synthesis; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
11	A6NJZ7	1639	RIM3C_HUMAN RIMS-binding protein 3C OS=Homo s...	35	3.2	32.3	49	74
12	A6NNM3	1639	RIM3B_HUMAN RIMS-binding protein 3B OS=Homo s...	35	3.3	32.3	49	74
13	A7MV01	386	GAL1_VIBHB Galactokinase OS=Vibrio harveyi (s...	51	7.4	31.2	33	59	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004335; F:galactokinase activity; IEA:EC.
									GO:0006012; P:galactose metabolic process; IEA:UniProtKB-KW.
14	Q8DBN9	386	GAL1_VIBVU Galactokinase OS=Vibrio vulnificus...	52	9.5	30.8	31	62	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004335; F:galactokinase activity; IEA:EC.
									GO:0006012; P:galactose metabolic process; IEA:UniProtKB-KW.
15	Q9Y8G8	1587	TOP2_PENCH DNA topoisomerase 2 OS=Penicillium...	26	9.5	31.2	42	77	GO:0005694; C:chromosome; IEA:InterPro.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003918; F:DNA topoisomerase (ATP-hydrolyzing) activity; IEA:EC.
									GO:0006265; P:DNA topological change; IEA:InterPro.
16	Q7MI80	386	GAL1_VIBVY Galactokinase OS=Vibrio vulnificus...	52	9.6	30.8	31	62	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004335; F:galactokinase activity; IEA:EC.
									GO:0006012; P:galactose metabolic process; IEA:UniProtKB-KW.
17	Q87M60	386	GAL1_VIBPA Galactokinase OS=Vibrio parahaemol...	51	10	30.8	31	61	GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004335; F:galactokinase activity; IEA:EC.
									GO:0006012; P:galactose metabolic process; IEA:UniProtKB-KW.

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