Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR119C
Length:
541
Number of sequences:
5887
Description:
YGR119C NUP57 SGDID:S000003351, Chr VII from 729671-728046, Genome Release 64-1-1, reverse complement, Verified ORF, "Nucleoporin, essential subunit of the nuclear pore complex (NPC), functions as the organizing center of an NPC subcomplex containing Nsp1p, Nup49p, Nup57p, and Nic96p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P48837    541   NUP57_YEAST Nucleoporin NUP57 OS=Saccharomyce...5410     1070     100     100GO:0055125; C:Nic96 complex; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006999; P:nuclear pore organization; IMP:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.
2O42963    403   NUP44_SCHPO Nucleoporin nup44 OS=Schizosaccha...4102e-41     158     27     50GO:0005829; C:cytosol; IDA:PomBase.::GO:0031965; C:nuclear membrane; IDA:PomBase.::GO:0005643; C:nuclear pore; TAS:PomBase.
GO:0007346; P:regulation of mitotic cell cycle; IMP:PomBase.::GO:0006407; P:rRNA export from nucleus; ISS:PomBase.
3Q02199    472   NUP49_YEAST Nucleoporin NUP49/NSP49 OS=Saccha...2100.044     40     33     40GO:0055125; C:Nic96 complex; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0006409; P:tRNA export from nucleus; IMP:SGD.
4Q54EQ8    2053   NUP98_DICDI Nuclear pore complex protein Nup9...1810.000000001     65.5     36     47GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; ISS:dictyBase.
GO:0005215; F:transporter activity; ISS:dictyBase.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006913; P:nucleocytoplasmic transport; ISS:dictyBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
5G5EEH9    1678   NUP98_CAEEL Nuclear pore complex protein Nup9...3000.0000000004     66.6     36     43GO:0005643; C:nuclear pore; IEA:InterPro.::GO:0043186; C:P granule; IDA:WormBase.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040039; P:inductive cell migration; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006997; P:nucleus organization; IMP:WormBase.::GO:0006810; P:transport; IEA:InterPro.
6P49687    1317   NU145_YEAST Nucleoporin NUP145 OS=Saccharomyc...1360.32     37.7     35     43GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0031080; C:Nup107-160 complex; IDA:SGD.
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:SGD.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0050000; P:chromosome localization; IMP:SGD.::GO:0031081; P:nuclear pore distribution; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0034398; P:telomere tethering at nuclear periphery; IMP:SGD.::GO:0006409; P:tRNA export from nucleus; IMP:SGD.
7Q02630    1113   NU116_YEAST Nucleoporin NUP116/NSP116 OS=Sacc...2140.0008     46.2     37     43GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0055126; C:Nup82 complex; IDA:SGD.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0006999; P:nuclear pore organization; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0006409; P:tRNA export from nucleus; IMP:SGD.
8Q02629    959   NU100_YEAST Nucleoporin NUP100/NSP100 OS=Sacc...2550.6     36.6     35     44GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0031990; P:mRNA export from nucleus in response to heat stress; IMP:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
9Q9V6B9    610   NUP54_DROME Probable nucleoporin Nup54 OS=Dro...2210.00000006     59.3     24     44GO:0005643; C:nuclear pore; ISS:UniProtKB.
GO:0005487; F:nucleocytoplasmic transporter activity; ISS:UniProtKB.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006607; P:NLS-bearing substrate import into nucleus; IMP:FlyBase.
10Q09793    425   NUP45_SCHPO Nucleoporin nup45 OS=Schizosaccha...1860.36     37     35     42GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0031965; C:nuclear membrane; IDA:PomBase.::GO:0005643; C:nuclear pore; TAS:PomBase.
GO:0051301; P:cell division; IMP:PomBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006913; P:nucleocytoplasmic transport; TAS:PomBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
11Q9UTK4    1778   NU189_SCHPO Nucleoporin nup189 OS=Schizosacch...3565.1     33.9     31     37GO:0031965; C:nuclear membrane; IDA:PomBase.::GO:0031080; C:Nup107-160 complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0051301; P:cell division; IMP:PomBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006997; P:nucleus organization; IMP:PomBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006407; P:rRNA export from nucleus; ISS:PomBase.
12Q8BTS4    510   NUP54_MOUSE Nuclear pore complex protein Nup5...2030.00004     50.1     24     47GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
13P70582    510   NUP54_RAT Nuclear pore complex protein Nup54 ...2030.00008     48.9     23     47GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IDA:UniProtKB.
GO:0005487; F:nucleocytoplasmic transporter activity; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006605; P:protein targeting; IDA:UniProtKB.
14P52948    1817   NUP98_HUMAN Nuclear pore complex protein Nup9...2430.1     39.3     30     39GO:0005829; C:cytosol; TAS:Reactome.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:ProtInc.::GO:0031080; C:Nup107-160 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0017056; F:structural constituent of nuclear pore; NAS:UniProtKB.::GO:0005215; F:transporter activity; TAS:ProtInc.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0006260; P:DNA replication; IMP:UniProtKB.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006999; P:nuclear pore organization; NAS:UniProtKB.::GO:0000059; P:protein import into nucleus, docking; NAS:UniProtKB.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
15P49793    1816   NUP98_RAT Nuclear pore complex protein Nup98-...1470.34     37.7     34     41GO:0005654; C:nucleoplasm; IDA:RGD.::GO:0031080; C:Nup107-160 complex; ISS:UniProtKB.
GO:0042277; F:peptide binding; IDA:RGD.::GO:0005515; F:protein binding; IPI:RGD.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000059; P:protein import into nucleus, docking; IMP:RGD.
16Q7Z3B4    507   NUP54_HUMAN Nucleoporin p54 OS=Homo sapiens (...2030.001     45.4     23     47GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; TAS:ProtInc.::GO:0005654; C:nucleoplasm; TAS:ProtInc.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
17Q80U93    2085   NU214_MOUSE Nuclear pore complex protein Nup2...2250.5     37     31     40GO:0005643; C:nuclear pore; TAS:MGI.
GO:0005487; F:nucleocytoplasmic transporter activity; IMP:MGI.
GO:0006406; P:mRNA export from nucleus; IMP:MGI.::GO:0006606; P:protein import into nucleus; IMP:MGI.::GO:0051726; P:regulation of cell cycle; IMP:MGI.
18P14907    823   NSP1_YEAST Nucleoporin NSP1 OS=Saccharomyces ...871.4     35.4     40     49GO:0055125; C:Nic96 complex; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0055126; C:Nup82 complex; IDA:SGD.
GO:0005543; F:phospholipid binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0017056; F:structural constituent of nuclear pore; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0097064; P:ncRNA export from nucleus; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IGI:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0000056; P:ribosomal small subunit export from nucleus; IMP:SGD.::GO:0006409; P:tRNA export from nucleus; IMP:SGD.
19Q9W1X4    1711   NU214_DROME Nuclear pore complex protein Nup2...772     35     39     52GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0005643; C:nuclear pore; IMP:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000059; P:protein import into nucleus, docking; IDA:UniProtKB.::GO:0007184; P:SMAD protein import into nucleus; IMP:FlyBase.
20Q64060    713   DDX4_RAT Probable ATP-dependent RNA helicase ...903.8     33.9     33     48GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.::GO:0071546; C:pi-body; ISS:UniProtKB.::GO:0071547; C:piP-body; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
21Q99323    2057   MYSN_DROME Myosin heavy chain, non-muscle OS=...1763.8     34.3     22     45GO:0045179; C:apical cortex; TAS:FlyBase.::GO:0032154; C:cleavage furrow; IDA:FlyBase.::GO:0016460; C:myosin II complex; IDA:FlyBase.::GO:0016461; C:unconventional myosin complex; NAS:FlyBase.::GO:0030018; C:Z disc; IDA:FlyBase.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003774; F:motor activity; ISS:FlyBase.::GO:0032027; F:myosin light chain binding; IPI:FlyBase.
GO:0007496; P:anterior midgut development; IMP:FlyBase.::GO:0035017; P:cuticle pattern formation; IMP:FlyBase.::GO:0000910; P:cytokinesis; IMP:FlyBase.::GO:0046664; P:dorsal closure, amnioserosa morphology change; IMP:FlyBase.::GO:0046663; P:dorsal closure, leading edge cell differentiation; IMP:FlyBase.::GO:0007395; P:dorsal closure, spreading of leading edge cells; IMP:FlyBase.::GO:0045200; P:establishment of neuroblast polarity; TAS:FlyBase.::GO:0001736; P:establishment of planar polarity; NAS:FlyBase.::GO:0045184; P:establishment of protein localization; IMP:FlyBase.::GO:0008258; P:head involution; IMP:FlyBase.::GO:0035317; P:imaginal disc-derived wing hair organization; IGI:FlyBase.::GO:0070986; P:left/right axis specification; IMP:FlyBase.::GO:0007443; P:Malpighian tubule morphogenesis; IMP:FlyBase.::GO:0006936; P:muscle contraction; IMP:FlyBase.::GO:0031036; P:myosin II filament assembly; IDA:FlyBase.::GO:0007297; P:ovarian follicle cell migration; TAS:FlyBase.::GO:0051259; P:protein oligomerization; IDA:FlyBase.::GO:0035159; P:regulation of tube length, open tracheal system; IMP:FlyBase.::GO:0007435; P:salivary gland morphogenesis; IMP:FlyBase.::GO:0045214; P:sarcomere organization; IMP:FlyBase.
22P35658    2090   NU214_HUMAN Nuclear pore complex protein Nup2...994     34.3     36     44GO:0005829; C:cytosol; TAS:Reactome.::GO:0005643; C:nuclear pore; TAS:ProtInc.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0010467; P:gene expression; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0016071; P:mRNA metabolic process; TAS:Reactome.::GO:0006611; P:protein export from nucleus; IMP:MGI.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
23P40477    1460   NU159_YEAST Nucleoporin NUP159 OS=Saccharomyc...1434.2     33.9     33     47GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0055126; C:Nup82 complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0097064; P:ncRNA export from nucleus; IMP:SGD.::GO:0031081; P:nuclear pore distribution; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0006611; P:protein export from nucleus; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0000056; P:ribosomal small subunit export from nucleus; IMP:SGD.
24P49790    1475   NU153_HUMAN Nuclear pore complex protein Nup1...1505.5     33.5     33     46GO:0005737; C:cytoplasm; IDA:HPA.::GO:0031965; C:nuclear membrane; IDA:HPA.::GO:0005643; C:nuclear pore; TAS:ProtInc.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005215; F:transporter activity; TAS:ProtInc.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
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