Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR116W
Length:
1451
Number of sequences:
5887
Description:
YGR116W SPT6 SGDID:S000003348, Chr VII from 720409-724764, Genome Release 64-1-1, Verified ORF, "Transcription elongation factor required for the maintenance of chromatin structure during transcription in order to inhibit transcription from promoters within the coding region"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P23615    1451   SPT6_YEAST Transcription elongation factor SP...14510     2986     100     100GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.::GO:0035327; C:transcriptionally active chromatin; IDA:SGD.
GO:0000991; F:core RNA polymerase II binding transcription factor activity; IMP:SGD.::GO:0001073; F:DNA binding transcription antitermination factor activity; IMP:SGD.::GO:0042393; F:histone binding; IDA:SGD.::GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0031491; F:nucleosome binding; IMP:SGD.
GO:0070827; P:chromatin maintenance; IMP:SGD.::GO:0006338; P:chromatin remodeling; IMP:SGD.::GO:0000433; P:negative regulation of transcription from RNA polymerase II promoter by glucose; IMP:SGD.::GO:0006334; P:nucleosome assembly; IDA:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0071931; P:positive regulation of transcription involved in G1/S phase of mitotic cell cycle; IMP:SGD.::GO:0000414; P:regulation of histone H3-K36 methylation; IMP:SGD.::GO:0031440; P:regulation of mRNA 3'-end processing; IMP:SGD.::GO:0060303; P:regulation of nucleosome density; IMP:SGD.::GO:0034401; P:regulation of transcription by chromatin organization; IMP:SGD.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0043618; P:regulation of transcription from RNA polymerase II promoter in response to stress; IMP:SGD.::GO:0001178; P:regulation of transcriptional start site selection at RNA polymerase II promoter; IMP:SGD.
2Q6FLB1    1449   SPT6_CANGA Transcription elongation factor SP...14470     2217     76     89GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
3Q75EP8    1432   SPT6_ASHGO Transcription elongation factor SP...14350     2019     71     84GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4Q6CVK3    1460   SPT6_KLULA Transcription elongation factor SP...14400     1955     70     84GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
5Q6BVE1    1439   SPT6_DEBHA Transcription elongation factor SP...14710     753     35     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6Q3MNT0    1401   SPT6_CANAL Transcription elongation factor SP...14400     708     35     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0030448; P:hyphal growth; IMP:CGD.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IGI:CGD.
7Q4HYQ4    1408   SPT6_GIBZE Transcription elongation factor SP...14380     671     33     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
8Q5B7Q7    1417   SPT6_EMENI Transcription elongation factor sp...14480     669     33     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9Q2U561    1422   SPT6_ASPOR Transcription elongation factor sp...14600     663     33     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
10Q4WWH6    1420   SPT6_ASPFU Transcription elongation factor sp...14490     636     31     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
11Q09915    1365   SPT6_SCHPO Transcription elongation factor sp...14760     593     32     52GO:0005739; C:mitochondrion; ISS:PomBase.::GO:0000790; C:nuclear chromatin; ISS:PomBase.::GO:0008023; C:transcription elongation factor complex; ISS:PomBase.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006336; P:DNA replication-independent nucleosome assembly; ISS:PomBase.::GO:0043486; P:histone exchange; NAS:PomBase.::GO:0034401; P:regulation of transcription by chromatin organization; ISS:PomBase.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:PomBase.
12Q8NIV6    1402   SPT6_NEUCR Transcription elongation factor sp...12913e-172     560     30     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13P0CR72    1506   SPT6_CRYNJ Transcription elongation factor SP...13031e-134     458     27     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
14Q4PI89    1723   SPT6_USTMA Transcription elongation factor SP...15663e-134     461     28     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
15P0CR73    1506   SPT6_CRYNB Transcription elongation factor SP...13035e-134     457     27     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
16Q7KZ85    1726   SPT6H_HUMAN Transcription elongation factor S...13968e-85     310     24     44GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:ProtInc.
GO:0006338; P:chromatin remodeling; NAS:UniProtKB.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
17Q62383    1726   SPT6H_MOUSE Transcription elongation factor S...13664e-84     308     24     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
18Q8UVK2    1726   SPT6H_DANRE Transcription elongation factor S...13601e-76     285     24     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0035050; P:embryonic heart tube development; IMP:ZFIN.::GO:0071599; P:otic vesicle development; IMP:ZFIN.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0001756; P:somitogenesis; IMP:ZFIN.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
19Q9W420    1831   SPT6H_DROME Transcription elongation factor S...14692e-75     281     24     41GO:0035363; C:histone locus body; IDA:FlyBase.::GO:0005705; C:polytene chromosome interband; IDA:UniProtKB.::GO:0005703; C:polytene chromosome puff; IDA:UniProtKB.::GO:0008023; C:transcription elongation factor complex; IPI:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; IDA:FlyBase.
GO:0003682; F:chromatin binding; IDA:FlyBase.::GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IMP:FlyBase.::GO:0002805; P:regulation of antimicrobial peptide biosynthetic process; IMP:FlyBase.::GO:0006366; P:transcription from RNA polymerase II promoter; IEP:UniProtKB.
20Q93148    1521   SPT6H_CAEBR Suppressor of Ty 6 homolog OS=Cae...12858e-65     246     23     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
21P34703    1521   SPT6H_CAEEL Suppressor of Ty 6 homolog OS=Cae...3250.0000000000001     80.5     23     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
22P46837    773   YHGF_ECOLI Protein yhgF OS=Escherichia coli (...2290.00000000001     73.2     27     47
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
23P57072    757   YHGF_NEIMA Uncharacterized protein NMA0194 OS...1880.0000000003     68.6     28     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:InterPro.
24Q51152    757   YHGF_NEIMB Uncharacterized protein NMB0075 OS...1880.0000000004     68.2     28     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:InterPro.
25P71353    762   Y568_HAEIN Uncharacterized protein HI_0568 OS...2230.00000001     63.2     27     48
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:InterPro.
26Q45388    791   TEX_BORPE Protein tex OS=Bordetella pertussis...1880.000001     57     25     47
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
27Q8N5C6    995   SRBD1_HUMAN S1 RNA-binding domain-containing ...2260.00001     53.9     23     42
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
28Q5RDI0    995   SRBD1_PONAB S1 RNA-binding domain-containing ...2550.00001     53.5     23     42
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
29O31489    719   YDCI_BACSU Uncharacterized protein ydcI OS=Ba...1820.16     40     26     46
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
30Q497V5    1015   SRBD1_MOUSE S1 RNA-binding domain-containing ...2500.17     40     21     37
GO:0016788; F:hydrolase activity, acting on ester bonds; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
31Q6CNY4    1489   INO80_KLULA Putative DNA helicase INO80 OS=12...1132.4     36.6     26     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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