UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YGR104C

Length:

307

Number of sequences:

5887

Description:

YGR104C SRB5 SGDID:S000003336, Chr VII from 698368-697445, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; involved in telomere maintenance"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P32585	307	MED18_YEAST Mediator of RNA polymerase II tra...	307	0	630	100	100	GO:0070847; C:core mediator complex; IDA:SGD.::GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0000991; F:core RNA polymerase II binding transcription factor activity; IDA:SGD.::GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.::GO:0001135; F:RNA polymerase II transcription factor recruiting transcription factor activity; IMP:SGD.::GO:0001129; F:TBP-class protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly; IDA:SGD.
									GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:SGD.::GO:0001113; P:transcriptional open complex formation at RNA polymerase II promoter; IMP:SGD.
2	Q6FSU0	266	MED18_CANGA Mediator of RNA polymerase II tra...	299	2e-63	207	36	58	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
3	Q75EI4	258	MED18_ASHGO Mediator of RNA polymerase II tra...	306	1e-61	202	33	55	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
4	Q6CQQ0	255	MED18_KLULA Mediator of RNA polymerase II tra...	306	1e-55	187	38	55	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
5	Q6CDK1	231	MED18_YARLI Mediator of RNA polymerase II tra...	205	0.000000000006	67.4	26	43	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
6	Q6BXL9	341	MED18_DEBHA Mediator of RNA polymerase II tra...	33	0.027	39.3	48	70	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
7	A3LU54	348	MED18_PICST Mediator of RNA polymerase II tra...	30	0.015	40	53	77	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
8	Q5B128	265	MED18_EMENI Mediator of RNA polymerase II tra...	180	0.00000005	56.6	26	42	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
9	A1CE73	278	MED18_ASPCL Mediator of RNA polymerase II tra...	151	0.0000001	55.8	25	45	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
10	Q4WNC6	268	MED18_ASPFU Mediator of RNA polymerase II tra...	151	0.0000001	55.5	25	46	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
11	Q2UMB8	273	MED18_ASPOR Mediator of RNA polymerase II tra...	161	0.0000002	55.1	24	47	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
12	Q1E065	267	MED18_COCIM Mediator of RNA polymerase II tra...	202	0.0000004	53.9	24	43	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
13	Q59X40	351	MED18_CANAL Mediator of RNA polymerase II tra...	361	0.0000004	54.3	23	39	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
14	A2RBB7	271	MED18_ASPNC Mediator of RNA polymerase II tra...	154	0.0000005	53.9	23	45	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
15	A1DM82	268	MED18_NEOFI Mediator of RNA polymerase II tra...	151	0.000001	52.4	24	46	GO:0016592; C:mediator complex; IEA:InterPro.
									GO:0001104; F:RNA polymerase II transcription cofactor activity; IEA:InterPro.
16	Q19VA0	1396	RPOC2_CHLAT DNA-directed RNA polymerase subun...	118	2.9	33.5	23	47	GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
17	Q10179	652	SYG_SCHPO Putative glycine--tRNA ligase OS=Sc...	74	3.1	33.1	30	39	GO:0005829; C:cytosol; IDA:PomBase.::GO:0005739; C:mitochondrion; ISS:PomBase.
									GO:0005524; F:ATP binding; ISS:PomBase.::GO:0004820; F:glycine-tRNA ligase activity; ISS:UniProtKB.::GO:0046983; F:protein dimerization activity; ISS:UniProtKB.
									GO:0015966; P:diadenosine tetraphosphate biosynthetic process; ISS:UniProtKB.::GO:0006426; P:glycyl-tRNA aminoacylation; ISS:PomBase.::GO:0032543; P:mitochondrial translation; NAS:PomBase.

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