Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR089W
Length:
936
Number of sequences:
5887
Description:
YGR089W NNF2 SGDID:S000003321, Chr VII from 656960-659770, Genome Release 64-1-1, Verified ORF, "Protein that exhibits physical and genetic interactions with Rpb8p, which is a subunit of RNA polymerases I, II, and III; computational analysis of large-scale protein-protein interaction data suggests a role in chromosome segregation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P53253    936   NNF2_YEAST Protein NNF2 OS=Saccharomyces cere...9360     1907     100     100GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005624; C:membrane fraction; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
2Q4WQG9    1019   ACRB_ASPFU Probable ubiquitination network si...3980.00000000000002     81.6     26     44GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
3B0Y4N5    1019   ACRB_ASPFC Probable ubiquitination network si...3980.00000000000002     81.6     26     44GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
4A1CIK0    1018   ACRB_ASPCL Probable ubiquitination network si...4280.00000000000009     79.3     26     42GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
5Q2UUI0    1013   ACRB_ASPOR Probable ubiquitination network si...3800.0000000000001     79.3     26     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
6Q876Q0    1015   ACRB_EMENI Ubiquitination network signaling p...4260.0000000000004     77.4     24     43GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
7A1CW63    1019   ACRB_NEOFI Probable ubiquitination network si...2910.0000000000006     76.6     27     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
8A2Q9L8    1017   ACRB_ASPNC Probable ubiquitination network si...3080.0000000001     69.3     27     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
9Q0CT23    1013   ACRB_ASPTN Probable ubiquitination network si...4170.0000000001     69.3     24     44GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
10Q6IRU2    248   TPM4_MOUSE Tropomyosin alpha-4 chain OS=Mus m...2130.00003     50.1     25     48GO:0030863; C:cortical cytoskeleton; IDA:MGI.::GO:0002102; C:podosome; IDA:MGI.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
11P09495    248   TPM4_RAT Tropomyosin alpha-4 chain OS=Rattus ...2080.0001     48.5     24     47
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006936; P:muscle contraction; TAS:RGD.
12P02561    248   TPM4_HORSE Tropomyosin alpha-4 chain OS=Equus...2130.0002     47.8     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
13P67937    248   TPM4_PIG Tropomyosin alpha-4 chain OS=Sus scr...2130.0002     47.4     24     47
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
14P67936    248   TPM4_HUMAN Tropomyosin alpha-4 chain OS=Homo ...2130.0002     47.4     24     47GO:0005829; C:cytosol; TAS:Reactome.::GO:0005862; C:muscle thin filament tropomyosin; TAS:ProtInc.::GO:0001725; C:stress fiber; IDA:MGI.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005509; F:calcium ion binding; NAS:UniProtKB.::GO:0008307; F:structural constituent of muscle; TAS:ProtInc.
GO:0030049; P:muscle filament sliding; TAS:Reactome.::GO:0006979; P:response to oxidative stress; IEP:BHF-UCL.
15Q95VA8    284   TPM_TRISP Tropomyosin OS=Trichinella spiralis...2110.0008     45.8     25     47
16Q8WR63    284   TPM_TRIPS Tropomyosin OS=Trichinella pseudosp...2110.001     45.4     25     47
17P04692    284   TPM1_RAT Tropomyosin alpha-1 chain OS=Rattus ...1790.002     44.7     26     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0030049; P:muscle filament sliding; IDA:BHF-UCL.::GO:0030336; P:negative regulation of cell migration; IGI:BHF-UCL.::GO:0032781; P:positive regulation of ATPase activity; IDA:BHF-UCL.::GO:0045785; P:positive regulation of cell adhesion; IGI:BHF-UCL.::GO:0051496; P:positive regulation of stress fiber assembly; IGI:BHF-UCL.::GO:0031529; P:ruffle organization; IGI:BHF-UCL.::GO:0042060; P:wound healing; IGI:BHF-UCL.
18P58772    284   TPM1_RABIT Tropomyosin alpha-1 chain OS=Oryct...1790.002     44.7     26     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
19P58771    284   TPM1_MOUSE Tropomyosin alpha-1 chain OS=Mus m...1790.002     44.7     26     50GO:0005862; C:muscle thin filament tropomyosin; TAS:MGI.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005200; F:structural constituent of cytoskeleton; TAS:MGI.
GO:0060048; P:cardiac muscle contraction; IMP:BHF-UCL.::GO:0001701; P:in utero embryonic development; IMP:MGI.::GO:0003065; P:positive regulation of heart rate by epinephrine; IMP:BHF-UCL.::GO:0055010; P:ventricular cardiac muscle tissue morphogenesis; IMP:BHF-UCL.
20P42639    284   TPM1_PIG Tropomyosin alpha-1 chain OS=Sus scr...1790.002     44.7     26     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
21P09493    284   TPM1_HUMAN Tropomyosin alpha-1 chain OS=Homo ...2030.002     44.7     25     49GO:0015629; C:actin cytoskeleton; IDA:HPA.::GO:0032059; C:bleb; IMP:BHF-UCL.::GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005862; C:muscle thin filament tropomyosin; TAS:ProtInc.::GO:0032587; C:ruffle membrane; IDA:BHF-UCL.::GO:0001725; C:stress fiber; IDA:BHF-UCL.
GO:0003779; F:actin binding; TAS:BHF-UCL.::GO:0005200; F:structural constituent of cytoskeleton; TAS:BHF-UCL.::GO:0008307; F:structural constituent of muscle; TAS:ProtInc.
GO:0060048; P:cardiac muscle contraction; IMP:BHF-UCL.::GO:0034614; P:cellular response to reactive oxygen species; IEP:BHF-UCL.::GO:0030049; P:muscle filament sliding; ISS:BHF-UCL.::GO:0030336; P:negative regulation of cell migration; ISS:BHF-UCL.::GO:0032781; P:positive regulation of ATPase activity; ISS:BHF-UCL.::GO:0045785; P:positive regulation of cell adhesion; ISS:BHF-UCL.::GO:0003065; P:positive regulation of heart rate by epinephrine; ISS:BHF-UCL.::GO:0051496; P:positive regulation of stress fiber assembly; ISS:BHF-UCL.::GO:0006937; P:regulation of muscle contraction; TAS:ProtInc.::GO:0031529; P:ruffle organization; ISS:BHF-UCL.::GO:0045214; P:sarcomere organization; IMP:BHF-UCL.::GO:0055010; P:ventricular cardiac muscle tissue morphogenesis; IMP:BHF-UCL.::GO:0042060; P:wound healing; ISS:BHF-UCL.
22Q5KR49    284   TPM1_BOVIN Tropomyosin alpha-1 chain OS=Bos t...1790.002     44.7     26     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
23Q9GZ69    284   TPM_MIMNO Tropomyosin OS=Mimachlamys nobilis ...1530.64     37     24     52
24O16127    278   TPM_ECHGR Tropomyosin A OS=Echinococcus granu...2370.005     43.5     21     46
25Q95PU1    284   TPM_ECHMU Tropomyosin OS=Echinococcus multilo...2370.008     43.1     21     46
26P13104    284   TPM1_DANRE Tropomyosin alpha-1 chain OS=Danio...2030.011     42.4     25     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
27O54874    1732   MRCKA_RAT Serine/threonine-protein kinase MRC...1530.018     42.7     24     52GO:0042641; C:actomyosin; IDA:UniProtKB.::GO:0031252; C:cell leading edge; IDA:UniProtKB.::GO:0005911; C:cell-cell junction; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IDA:UniProtKB.::GO:0042802; F:identical protein binding; IPI:UniProtKB.::GO:0000287; F:magnesium ion binding; IDA:UniProtKB.::GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0004674; F:protein serine/threonine kinase activity; IDA:UniProtKB.::GO:0005083; F:small GTPase regulator activity; IEA:InterPro.
GO:0031532; P:actin cytoskeleton reorganization; IDA:UniProtKB.::GO:0031032; P:actomyosin structure organization; IMP:UniProtKB.::GO:0016477; P:cell migration; IMP:UniProtKB.::GO:0035556; P:intracellular signal transduction; IEA:InterPro.::GO:0051056; P:regulation of small GTPase mediated signal transduction; IDA:UniProtKB.
28P84335    284   TPM1_LIZAU Tropomyosin alpha-1 chain OS=Liza ...1790.027     41.2     24     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
29P58773    284   TPM1_COTJA Tropomyosin alpha-1 chain OS=Cotur...1940.029     41.2     24     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
30P04268    284   TPM1_CHICK Tropomyosin alpha-1 chain OS=Gallu...1940.029     41.2     24     49
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
31P41114    242   TPM1_PODCA Tropomyosin-1 OS=Podocoryne carnea...2010.035     40.8     22     47
records
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