Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR085C
Length:
174
Number of sequences:
5887
Description:
YGR085C RPL11B SGDID:S000003317, Chr VII from 648907-648383, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl11Ap; involved in ribosomal assembly; depletion causes degradation of proteins and RNA of the 60S subunit; has similarity to E. coli L5 and rat L11"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
841Q318J6    179   RL5_PROM9 50S ribosomal protein L5 OS=Prochlo...1010.0001     44.3     28     49GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006412; P:translation; IEA:InterPro.
842C4XLY5    179   RL5_DESMR 50S ribosomal protein L5 OS=Desulfo...1000.0001     44.3     28     53GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006412; P:translation; IEA:InterPro.
843A3PF35    179   RL5_PROM0 50S ribosomal protein L5 OS=Prochlo...1010.0001     44.3     28     49GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006412; P:translation; IEA:InterPro.
844A8G749    179   RL5_PROM2 50S ribosomal protein L5 OS=Prochlo...1010.0001     44.3     28     49GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006412; P:translation; IEA:InterPro.
845Q64NM0    185   RL5_BACFR 50S ribosomal protein L5 OS=Bactero...1380.0001     44.3     28     48GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006412; P:translation; IEA:InterPro.
846Q5L8C1    185   RL5_BACFN 50S ribosomal protein L5 OS=Bactero...1380.0001     44.3     28     48GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006412; P:translation; IEA:InterPro.
847A9BCN5    179   RL5_PROM4 50S ribosomal protein L5 OS=Prochlo...1010.0001     43.9     28     49GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006412; P:translation; IEA:InterPro.
848A6LEH9    185   RL5_PARD8 50S ribosomal protein L5 OS=11152)....1260.0003     43.1     29     48GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006412; P:translation; IEA:InterPro.
849Q5Z1S0    187   RL5_NOCFA 50S ribosomal protein L5 OS=Nocardi...830.0003     43.1     30     49GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006412; P:translation; IEA:InterPro.
850Q6MJ25    179   RL5_BDEBA 50S ribosomal protein L5 OS=/ HD100...1360.0006     42     24     47GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006412; P:translation; IEA:InterPro.
851Q9TLU4    182   RK5_CYACA 50S ribosomal protein L5, chloropla...1290.001     41.2     26     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
852P46749    231   RM05_PROWI 60S ribosomal protein L5, mitochon...920.002     40.8     26     52GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
853C6C197    179   RL5_DESAD 50S ribosomal protein L5 OS=VKM B-1...1040.006     39.3     26     51GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006412; P:translation; IEA:InterPro.
854Q85FV1    177   RK5_CYAME 50S ribosomal protein L5, chloropla...1260.009     38.9     24     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
855Q2EEW3    181   RK5_HELSJ 50S ribosomal protein L5, plastid O...1480.02     37.7     22     47GO:0009536; C:plastid; IEA:UniProtKB-SubCell.::GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
856A8Z678    186   RL5_SULMW 50S ribosomal protein L5 OS=Sulcia ...1320.048     36.6     24     44GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006412; P:translation; IEA:InterPro.
857Q9MAT2    665   PPR10_ARATH Pentatricopeptide repeat-containi...900.69     33.9     32     44
GO:0005488; F:binding; IEA:InterPro.
records
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