UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YGR075C

Length:

242

Number of sequences:

5887

Description:

YGR075C PRP38 SGDID:S000003307, Chr VII from 636875-636147, Genome Release 64-1-1, reverse complement, Verified ORF, "Unique component of the U4/U6.U5 tri-snRNP particle, required for conformational changes which result in the catalytic activation of the spliceosome; dispensible for spliceosome assembly"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	Q00723	242	PRP38_YEAST Pre-mRNA-splicing factor 38 OS=Sa...	242	1e-178	498	100	100	GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
									GO:0005515; F:protein binding; IPI:IntAct.
									GO:0000388; P:spliceosome conformational change to release U4 (or U4atac) and U1 (or U11); IMP:SGD.
2	Q6FK84	1804	IML1_CANGA Vacuolar membrane-associated prote...	84	0.58	35	29	39	GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
									GO:0035556; P:intracellular signal transduction; IEA:InterPro.
3	Q6DHU4	313	PR38A_DANRE Pre-mRNA-splicing factor 38A OS=D...	202	3.1	32.3	24	43	GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
									GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
4	Q9UUD2	210	PRP38_SCHPO Pre-mRNA-splicing factor 38 OS=Sc...	109	6.3	31.2	27	47	GO:0005829; C:cytosol; IDA:PomBase.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.
									GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.

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