Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR056W
Length:
928
Number of sequences:
5887
Description:
YGR056W RSC1 SGDID:S000003288, Chr VII from 601661-604447, Genome Release 64-1-1, Verified ORF, "Component of the RSC chromatin remodeling complex; required for expression of mid-late sporulation-specific genes; contains two essential bromodomains, a bromo-adjacent homology (BAH) domain, and an AT hook"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q3UQU0    596   BRD9_MOUSE Bromodomain-containing protein 9 O...1000.00009     50.1     33     52
32Q54BA2    806   Y3800_DICDI Ankyrin repeat, bromo and BTB dom...710.0001     50.1     38     63
GO:0005524; F:ATP binding; ISS:dictyBase.::GO:0004672; F:protein kinase activity; ISS:dictyBase.
33O15016    1216   TRI66_HUMAN Tripartite motif-containing prote...780.0001     50.1     32     56GO:0016235; C:aggresome; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0008270; F:zinc ion binding; IEA:InterPro.
34Q9H8M2    597   BRD9_HUMAN Bromodomain-containing protein 9 O...1000.0001     49.7     33     52
GO:0003676; F:nucleic acid binding; NAS:UniProtKB.
35P25439    1638   BRM_DROME ATP-dependent helicase brm OS=Droso...650.0004     48.1     32     58GO:0035060; C:brahma complex; IDA:FlyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:FlyBase.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0043044; P:ATP-dependent chromatin remodeling; IDA:FlyBase.::GO:0007409; P:axonogenesis; IMP:FlyBase.::GO:0070983; P:dendrite guidance; IMP:FlyBase.::GO:0035172; P:hemocyte proliferation; TAS:FlyBase.::GO:0007480; P:imaginal disc-derived leg morphogenesis; IGI:FlyBase.::GO:0008587; P:imaginal disc-derived wing margin morphogenesis; IMP:FlyBase.::GO:0008586; P:imaginal disc-derived wing vein morphogenesis; IMP:FlyBase.::GO:0007474; P:imaginal disc-derived wing vein specification; IMP:FlyBase.::GO:0007517; P:muscle organ development; IMP:FlyBase.::GO:0045749; P:negative regulation of S phase of mitotic cell cycle; IGI:FlyBase.::GO:0048477; P:oogenesis; TAS:FlyBase.::GO:0006911; P:phagocytosis, engulfment; IMP:FlyBase.::GO:0045742; P:positive regulation of epidermal growth factor receptor signaling pathway; IMP:FlyBase.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
36Q924W6    1242   TRI66_MOUSE Tripartite motif-containing prote...660.0001     49.7     33     58GO:0010369; C:chromocenter; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0042803; F:protein homodimerization activity; IPI:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:MGI.
37O44757    1312   LIN59_CAEEL Probable histone-lysine N-methylt...970.0002     49.3     26     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0018024; F:histone-lysine N-methyltransferase activity; IEA:EC.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007413; P:axonal fasciculation; IMP:WormBase.::GO:0016358; P:dendrite development; IMP:WormBase.::GO:0001715; P:ectodermal cell fate specification; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0048566; P:embryonic digestive tract development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0040014; P:regulation of multicellular organism growth; IMP:WormBase.::GO:0045138; P:tail tip morphogenesis; IMP:WormBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
38Q03330    439   GCN5_YEAST Histone acetyltransferase GCN5 OS=...1050.017     42.4     30     49GO:0005671; C:Ada2/Gcn5/Ada3 transcription activator complex; IDA:SGD.::GO:0000775; C:chromosome, centromeric region; IDA:SGD.::GO:0000124; C:SAGA complex; IDA:SGD.::GO:0046695; C:SLIK (SAGA-like) complex; IDA:SGD.
GO:0010484; F:H3 histone acetyltransferase activity; IDA:SGD.::GO:0070577; F:histone acetyl-lysine binding; IDA:SGD.::GO:0003713; F:transcription coactivator activity; TAS:SGD.
GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IMP:SGD.::GO:0034401; P:regulation of transcription by chromatin organization; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
39Q6FTW5    546   GCN5_CANGA Histone acetyltransferase GCN5 OS=...1050.006     43.9     30     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004402; F:histone acetyltransferase activity; IEA:EC.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
40Q12830    3046   BPTF_HUMAN Nucleosome-remodeling factor subun...680.77     37.4     31     47GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0016589; C:NURF complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0043565; F:sequence-specific DNA binding; IDA:HGNC.::GO:0008134; F:transcription factor binding; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007420; P:brain development; IMP:HGNC.::GO:0006338; P:chromatin remodeling; IDA:HGNC.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:HGNC.::GO:0006351; P:transcription, DNA-dependent; IMP:HGNC.
41Q497V6    772   BAHD1_MOUSE Bromo adjacent homology domain-co...1110.0002     48.5     29     45GO:0005677; C:chromatin silencing complex; ISS:UniProtKB.::GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0031507; P:heterochromatin assembly; ISS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
42Q8TBE0    780   BAHD1_HUMAN Bromo adjacent homology domain-co...1110.0004     48.1     29     45GO:0005677; C:chromatin silencing complex; IDA:UniProtKB.::GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0031507; P:heterochromatin assembly; IMP:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
43P55201    1214   BRPF1_HUMAN Peregrin OS=Homo sapiens (Human)....860.37     38.5     27     53GO:0005737; C:cytoplasm; IDA:HPA.::GO:0070776; C:MOZ/MORF histone acetyltransferase complex; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:HPA.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0043966; P:histone H3 acetylation; IDA:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
44Q9JHD1    813   KAT2B_MOUSE Histone acetyltransferase KAT2B O...670.24     38.9     34     51GO:0031672; C:A band; IDA:MGI.::GO:0042641; C:actomyosin; IDA:MGI.::GO:0016585; C:chromatin remodeling complex; ISS:UniProtKB.::GO:0031674; C:I band; IDA:MGI.::GO:0000776; C:kinetochore; IDA:MGI.
GO:0004861; F:cyclin-dependent protein kinase inhibitor activity; IDA:UniProtKB.::GO:0004402; F:histone acetyltransferase activity; IDA:MGI.::GO:0004468; F:lysine N-acetyltransferase activity; IDA:UniProtKB.::GO:0019901; F:protein kinase binding; IPI:UniProtKB.::GO:0003713; F:transcription coactivator activity; IDA:MGI.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045736; P:negative regulation of cyclin-dependent protein kinase activity; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IGI:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
45Q58F21    947   BRDT_HUMAN Bromodomain testis-specific protei...630.023     42.4     35     56GO:0005634; C:nucleus; IDA:HPA.
GO:0004674; F:protein serine/threonine kinase activity; TAS:ProtInc.::GO:0003713; F:transcription coactivator activity; TAS:ProtInc.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
46Q92830    837   KAT2A_HUMAN Histone acetyltransferase KAT2A O...670.39     38.1     34     49GO:0005671; C:Ada2/Gcn5/Ada3 transcription activator complex; IDA:BHF-UCL.::GO:0030914; C:STAGA complex; IDA:UniProtKB.::GO:0033276; C:transcription factor TFTC complex; IDA:UniProtKB.
GO:0010484; F:H3 histone acetyltransferase activity; IDA:BHF-UCL.::GO:0042826; F:histone deacetylase binding; IPI:UniProtKB.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.
GO:0006338; P:chromatin remodeling; TAS:ProtInc.::GO:0016578; P:histone deubiquitination; IDA:UniProtKB.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc.
47Q9JHD2    830   KAT2A_MOUSE Histone acetyltransferase KAT2A O...670.32     38.5     34     49GO:0030914; C:STAGA complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0010484; F:H3 histone acetyltransferase activity; IDA:MGI.::GO:0043997; F:histone acetyltransferase activity (H4-K12 specific); IDA:MGI.
GO:0008283; P:cell proliferation; IMP:MGI.::GO:0044154; P:histone H3-K14 acetylation; IDA:MGI.::GO:0001701; P:in utero embryonic development; IMP:MGI.::GO:0022037; P:metencephalon development; IMP:MGI.::GO:0030901; P:midbrain development; IMP:MGI.::GO:0035264; P:multicellular organism growth; IMP:MGI.::GO:0001843; P:neural tube closure; IMP:MGI.::GO:0042981; P:regulation of apoptotic process; IMP:MGI.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0001756; P:somitogenesis; IMP:MGI.::GO:0021537; P:telencephalon development; IMP:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
48P51123    2129   TAF1_DROME Transcription initiation factor TF...730.23     39.3     26     51GO:0005669; C:transcription factor TFIID complex; IDA:FlyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0035174; F:histone serine kinase activity; IDA:FlyBase.::GO:0043565; F:sequence-specific DNA binding; IDA:FlyBase.::GO:0001129; F:TBP-class protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly; IPI:FlyBase.::GO:0008134; F:transcription factor binding; IPI:FlyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016573; P:histone acetylation; IDA:FlyBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0060261; P:positive regulation of transcription initiation from RNA polymerase II promoter; IDA:BHF-UCL.::GO:0046425; P:regulation of JAK-STAT cascade; IMP:FlyBase.::GO:0000117; P:regulation of transcription involved in G2/M-phase of mitotic cell cycle; IMP:FlyBase.
49Q5ZKG2    651   BRD7_CHICK Bromodomain-containing protein 7 O...650.0005     47.4     38     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
50Q92831    832   KAT2B_HUMAN Histone acetyltransferase KAT2B O...670.22     38.9     36     51GO:0005671; C:Ada2/Gcn5/Ada3 transcription activator complex; IDA:BHF-UCL.::GO:0016585; C:chromatin remodeling complex; IDA:UniProtKB.::GO:0000125; C:PCAF complex; NAS:UniProtKB.
GO:0004861; F:cyclin-dependent protein kinase inhibitor activity; ISS:UniProtKB.::GO:0004402; F:histone acetyltransferase activity; IEA:EC.::GO:0042826; F:histone deacetylase binding; IPI:UniProtKB.::GO:0004468; F:lysine N-acetyltransferase activity; ISS:UniProtKB.::GO:0019901; F:protein kinase binding; ISS:UniProtKB.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.::GO:0008134; F:transcription factor binding; IPI:UniProtKB.
GO:0007050; P:cell cycle arrest; TAS:ProtInc.::GO:0032869; P:cellular response to insulin stimulus; IDA:BHF-UCL.::GO:0006338; P:chromatin remodeling; NAS:UniProtKB.::GO:0043966; P:histone H3 acetylation; IDA:BHF-UCL.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0018076; P:N-terminal peptidyl-lysine acetylation; IDA:UniProtKB.::GO:0008285; P:negative regulation of cell proliferation; IDA:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.
51Q67W65    1810   TAF1_ORYSJ Transcription initiation factor TF...940.76     37.4     27     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
52Q4R8Y1    947   BRDT_MACFA Bromodomain testis-specific protei...860.028     42     33     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
53Q9UUK2    454   GCN5_SCHPO Histone acetyltransferase gcn5 OS=...710.0007     47     37     59GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0000124; C:SAGA complex; IDA:PomBase.
GO:0010484; F:H3 histone acetyltransferase activity; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IGI:PomBase.::GO:0044154; P:histone H3-K14 acetylation; TAS:PomBase.::GO:0043971; P:histone H3-K18 acetylation; TAS:PomBase.::GO:0043972; P:histone H3-K23 acetylation; TAS:PomBase.::GO:0043970; P:histone H3-K9 acetylation; TAS:PomBase.::GO:0007131; P:reciprocal meiotic recombination; IMP:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
54Q93YS6    688   GTE9_ARATH Transcription factor GTE9 OS=Arabi...1080.0008     47     29     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
55Q56R14    1091   TRI33_XENLA E3 ubiquitin-protein ligase TRIM3...590.0008     47     41     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
56Q9Y7N0    578   BDF1_SCHPO SWR1 complex bromodomain subunit b...456.3     34.3     36     49GO:0000812; C:Swr1 complex; IDA:PomBase.
57Q02206    625   RSC4_YEAST Chromatin structure-remodeling com...880.026     42     31     53GO:0016586; C:RSC complex; IDA:UniProtKB.
GO:0070577; F:histone acetyl-lysine binding; IDA:SGD.
GO:0043044; P:ATP-dependent chromatin remodeling; IDA:UniProtKB.::GO:0000086; P:G2/M transition of mitotic cell cycle; IMP:SGD.::GO:0006337; P:nucleosome disassembly; IDA:SGD.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IDA:SGD.
58Q8WZM0    464   GCN5_YARLI Histone acetyltransferase GCN5 OS=...710.77     37     28     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004402; F:histone acetyltransferase activity; IEA:EC.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
59Q09472    2414   EP300_HUMAN Histone acetyltransferase p300 OS...670.001     46.2     36     58GO:0005813; C:centrosome; IDA:HPA.
GO:0050681; F:androgen receptor binding; IPI:BHF-UCL.::GO:0008013; F:beta-catenin binding; IPI:BHF-UCL.::GO:0001047; F:core promoter binding; IDA:UniProtKB.::GO:0004402; F:histone acetyltransferase activity; IDA:UniProtKB.::GO:0001102; F:RNA polymerase II activating transcription factor binding; IPI:BHF-UCL.::GO:0003713; F:transcription coactivator activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006915; P:apoptotic process; IMP:UniProtKB.::GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0042771; P:DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis; IDA:UniProtKB.::GO:0043967; P:histone H4 acetylation; IMP:UniProtKB.::GO:0045087; P:innate immune response; TAS:Reactome.::GO:0018076; P:N-terminal peptidyl-lysine acetylation; IDA:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0043923; P:positive regulation by host of viral transcription; IDA:BHF-UCL.::GO:0051091; P:positive regulation of sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0060765; P:regulation of androgen receptor signaling pathway; IDA:BHF-UCL.::GO:0043627; P:response to estrogen stimulus; IDA:UniProtKB.::GO:0001666; P:response to hypoxia; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
60Q756G9    452   GCN5_ASHGO Histone acetyltransferase GCN5 OS=...690.15     39.3     32     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004402; F:histone acetyltransferase activity; IEA:EC.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
61Q8H1D7    487   GTE5_ARATH Transcription factor GTE5, chlorop...1080.002     45.8     31     48GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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