Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR027W-B
Length:
1755
Number of sequences:
5887
Description:
YGR027W-B YGR027W-B SGDID:S000007406, Chr VII from 536057-537361,537363-541325, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91P0CX61    438   YF21A_YEAST Transposon Ty2-F Gag polyprotein ...4353e-120     391     49     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
92P0C2J7    1802   YH41B_YEAST Transposon Ty4-H Gag-Pol polyprot...2958e-32     140     31     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
93P47024    1803   YJ41B_YEAST Transposon Ty4-J Gag-Pol polyprot...2951e-31     139     31     48GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0032196; P:transposition; IEA:UniProtKB-KW.::GO:0046797; P:viral procapsid maturation; IEA:UniProtKB-KW.
94P10978    1328   POLX_TOBAC Retrovirus-related Pol polyprotein...4031e-19     99.8     23     42
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
95P04146    1409   COPIA_DROME Copia protein OS=Drosophila melan...3820.00000000007     71.2     23     43
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
96P25600    308   YCH4_YEAST Putative transposon Ty5-1 protein ...3290.00002     52     24     44
97Q87040    1146   POL_SFVCP Pro-Pol polyprotein OS=Simian foamy...2050.00008     51.6     26     41GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.
98P14350    1143   POL_FOAMV Pro-Pol polyprotein OS=Human spumar...2050.0007     48.5     25     41GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019012; C:virion; IEA:UniProtKB-SubCell.
GO:0004190; F:aspartic-type endopeptidase activity; IEA:UniProtKB-KW.::GO:0003887; F:DNA-directed DNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004523; F:ribonuclease H activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003964; F:RNA-directed DNA polymerase activity; IEA:UniProtKB-KW.
GO:0015074; P:DNA integration; IEA:UniProtKB-KW.::GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006278; P:RNA-dependent DNA replication; IEA:InterPro.
99P0A3L4    195   Y4601_AGRT7 Insertion element IS136 uncharact...850.078     40     29     51
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.
100P0A3L3    195   Y4601_AGRT5 Insertion element IS136 uncharact...850.078     40     29     51
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.
101P0AAV4    218   YBGJ_ECOLI Uncharacterized protein ybgJ OS=Es...910.25     38.9     29     40
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
102P0AAV5    218   YBGJ_ECO57 Uncharacterized protein ybgJ OS=Es...910.25     38.9     29     40
GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
103Q8H111    909   NLP1_ARATH Protein NLP1 OS=Arabidopsis thalia...1290.33     39.7     26     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
104Q32L53    366   LFG1_BOVIN Protein lifeguard 1 OS=Bos taurus ...1240.37     38.9     27     36GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
105P50555    461   TNR1A_PIG Tumor necrosis factor receptor supe...661.6     37     30     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.::GO:0005031; F:tumor necrosis factor-activated receptor activity; ISS:UniProtKB.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006954; P:inflammatory response; ISS:UniProtKB.::GO:0050729; P:positive regulation of inflammatory response; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006693; P:prostaglandin metabolic process; IEA:InterPro.
106Q49378    294   P32_MYCGA P32 adhesin OS=Mycoplasma gallisept...1411.6     36.6     30     38GO:0033111; C:attachment organelle membrane; IEA:UniProtKB-SubCell.::GO:0042995; C:cell projection; IEA:UniProtKB-KW.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
GO:0020035; P:cytoadherence to microvasculature, mediated by symbiont protein; IEA:UniProtKB-KW.::GO:0007157; P:heterophilic cell-cell adhesion; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.
107Q9Y7Q9    583   YCX2_SCHPO Probable metabolite transporter C2...832.2     36.6     33     45GO:0005783; C:endoplasmic reticulum; IDA:PomBase.::GO:0005794; C:Golgi apparatus; IDA:PomBase.::GO:0005887; C:integral to plasma membrane; ISS:PomBase.
GO:0005315; F:inorganic phosphate transmembrane transporter activity; ISS:PomBase.
108A8FME4    809   SYL_CAMJ8 Leucine--tRNA ligase OS=11828). GN=...1784.2     35.8     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004823; F:leucine-tRNA ligase activity; IEA:EC.
GO:0006429; P:leucyl-tRNA aminoacylation; IEA:InterPro.
109A7H2R6    809   SYL_CAMJD Leucine--tRNA ligase OS=269.97). GN...1784.3     35.8     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004823; F:leucine-tRNA ligase activity; IEA:EC.
GO:0006429; P:leucyl-tRNA aminoacylation; IEA:InterPro.
110A1W078    809   SYL_CAMJJ Leucine--tRNA ligase OS=Campylobact...1784.3     35.8     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004823; F:leucine-tRNA ligase activity; IEA:EC.
GO:0006429; P:leucyl-tRNA aminoacylation; IEA:InterPro.
111Q9PNK3    809   SYL_CAMJE Leucine--tRNA ligase OS=Campylobact...1784.5     35.8     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004823; F:leucine-tRNA ligase activity; IEA:EC.
GO:0006429; P:leucyl-tRNA aminoacylation; IEA:InterPro.
112Q5HU13    809   SYL_CAMJR Leucine--tRNA ligase OS=Campylobact...1784.8     35.8     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004823; F:leucine-tRNA ligase activity; IEA:EC.
GO:0006429; P:leucyl-tRNA aminoacylation; IEA:InterPro.
113Q6P6R0    348   LFG1_RAT Protein lifeguard 1 OS=Rattus norveg...1475.6     35     29     33GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005261; F:cation channel activity; NAS:RGD.
114Q6ZNG9    492   KRBA2_HUMAN KRAB-A domain-containing protein ...1295.7     35.4     23     43GO:0005622; C:intracellular; IEA:InterPro.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0015074; P:DNA integration; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
records
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