Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGR006W
Length:
251
Number of sequences:
5887
Description:
YGR006W PRP18 SGDID:S000003238, Chr VII from 506070-506825, Genome Release 64-1-1, Verified ORF, "Splicing factor involved in the positioning of the 3' splice site during the second catalytic step of splicing, part of snRNP U5, interacts with Slu7p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P33411    251   PRP18_YEAST Pre-mRNA-splicing factor 18 OS=Sa...2510     515     100     100GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.::GO:0005682; C:U5 snRNP; IDA:SGD.
GO:0000350; P:generation of catalytic spliceosome for second transesterification step; IDA:SGD.::GO:0071048; P:nuclear retention of unspliced pre-mRNA at the site of transcription; IMP:SGD.
2O94406    343   PRP18_SCHPO Pre-mRNA-splicing factor 18 OS=Sc...1121e-17     84.3     40     60GO:0005681; C:spliceosomal complex; ISS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
3Q5EAV6    342   PRP18_XENLA Pre-mRNA-splicing factor 18 OS=Xe...2032e-16     80.5     32     52GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
4Q9JKB8    342   PRP18_RAT Pre-mRNA-splicing factor 18 OS=Ratt...1000.00000000000002     74.7     39     62GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0019870; F:potassium channel inhibitor activity; IMP:RGD.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
5Q2HJ41    342   PRP18_BOVIN Pre-mRNA-splicing factor 18 OS=Bo...1000.00000000000002     74.7     39     62GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
6Q99633    342   PRP18_HUMAN Pre-mRNA-splicing factor 18 OS=Ho...1000.00000000000002     74.7     39     62GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; TAS:ProtInc.
GO:0006397; P:mRNA processing; TAS:ProtInc.::GO:0008380; P:RNA splicing; TAS:ProtInc.
7Q8BM39    342   PRP18_MOUSE Pre-mRNA-splicing factor 18 OS=Mu...1000.00000000000002     74.7     39     62GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
8Q5RE03    342   PRP18_PONAB Pre-mRNA-splicing factor 18 OS=Po...1000.00000000000002     74.7     39     62GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
9Q6GMH0    342   PRP18_DANRE Pre-mRNA-splicing factor 18 OS=Da...1010.00000000000009     73.2     38     61GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
10Q99W46    1141   SDRE_STAAN Serine-aspartate repeat-containing...1030.29     36.2     25     41GO:0005618; C:cell wall; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-KW.::GO:0016020; C:membrane; IEA:InterPro.
GO:0007155; P:cell adhesion; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.
11Q932F7    1141   SDRE_STAAM Serine-aspartate repeat-containing...1030.29     36.2     25     41GO:0005618; C:cell wall; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-KW.::GO:0016020; C:membrane; IEA:InterPro.
GO:0007155; P:cell adhesion; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.
12Q6GJA6    1137   BBP_STAAR Bone sialoprotein-binding protein O...1030.65     35     25     41GO:0005618; C:cell wall; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-KW.::GO:0016020; C:membrane; IEA:InterPro.
GO:0007155; P:cell adhesion; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.
13Q8NXX5    1141   SDRE_STAAW Serine-aspartate repeat-containing...1030.8     34.7     25     41GO:0005618; C:cell wall; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-KW.::GO:0016020; C:membrane; IEA:InterPro.
GO:0007155; P:cell adhesion; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.
14Q6GBS4    1141   SDRE_STAAS Serine-aspartate repeat-containing...1030.8     34.7     25     41GO:0005618; C:cell wall; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-KW.::GO:0016020; C:membrane; IEA:InterPro.
GO:0007155; P:cell adhesion; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.
15Q14U76    1149   BBP_STAAU Bone sialoprotein-binding protein O...1031.2     34.3     25     41GO:0005618; C:cell wall; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-KW.::GO:0016020; C:membrane; IEA:InterPro.
GO:0007155; P:cell adhesion; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.
16Q9VJJ7    1128   TRPG_DROME Transient receptor potential-gamma...1062     33.5     25     47GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0016028; C:rhabdomere; IDA:UniProtKB.
GO:0005262; F:calcium channel activity; ISS:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0050908; P:detection of light stimulus involved in visual perception; ISS:UniProtKB.
17O86489    1166   SDRE_STAAE Serine-aspartate repeat-containing...822.4     33.1     26     44GO:0005618; C:cell wall; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-KW.::GO:0016020; C:membrane; IEA:InterPro.
GO:0007155; P:cell adhesion; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.
18Q2FJ77    1154   SDRE_STAA3 Serine-aspartate repeat-containing...822.4     33.1     26     44GO:0005618; C:cell wall; IEA:UniProtKB-SubCell.::GO:0005576; C:extracellular region; IEA:UniProtKB-KW.::GO:0016020; C:membrane; IEA:InterPro.
GO:0007155; P:cell adhesion; IEA:InterPro.::GO:0009405; P:pathogenesis; IEA:UniProtKB-KW.
19Q4L6C5    453   ARLS_STAHJ Signal transduction histidine-prot...632.9     32.7     37     54GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0000155; F:two-component sensor activity; IEA:InterPro.
GO:0018106; P:peptidyl-histidine phosphorylation; IEA:InterPro.
20Q6G060    136   RS6_BARQU 30S ribosomal protein S6 OS=Bartone...757.1     30.4     27     56GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
21Q5HPC4    456   ARLS_STAEQ Signal transduction histidine-prot...638.4     31.2     33     52GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0000155; F:two-component sensor activity; IEA:InterPro.
GO:0018106; P:peptidyl-histidine phosphorylation; IEA:InterPro.
22Q8CSL7    456   ARLS_STAES Signal transduction histidine-prot...638.7     31.2     33     52GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0000155; F:two-component sensor activity; IEA:InterPro.
GO:0018106; P:peptidyl-histidine phosphorylation; IEA:InterPro.
23Q6G446    135   RS6_BARHE 30S ribosomal protein S6 OS=hensela...759.4     30.4     24     53GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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