Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL247W
Length:
197
Number of sequences:
5887
Description:
YGL247W BRR6 SGDID:S000003216, Chr VII from 36933-37526, Genome Release 64-1-1, Verified ORF, "Essential nuclear envelope integral membrane protein required for nuclear envelope morphology, nuclear pore complex localization, nuclear export; exhibits synthetic lethal genetic interactions with genes involved in lipid metabolism"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P53062    197   BRR6_YEAST Nucleus export protein BRR6 OS=Sac...1972e-144     407     100     100GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0006406; P:mRNA export from nucleus; IMP:SGD.::GO:0006998; P:nuclear envelope organization; IEA:InterPro.::GO:0006611; P:protein export from nucleus; IMP:SGD.
2Q9UT30    297   BRR6_SCHPO Nucleus export protein brr6 OS=Sch...1410.0000000000006     68.9     28     52GO:0005789; C:endoplasmic reticulum membrane; IC:PomBase.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; ISS:PomBase.
GO:0006406; P:mRNA export from nucleus; ISS:PomBase.::GO:0006998; P:nuclear envelope organization; ISS:PomBase.::GO:0051292; P:nuclear pore complex assembly; ISS:PomBase.::GO:0006611; P:protein export from nucleus; IGI:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IMP:PomBase.
3P38770    471   BRL1_YEAST Nucleus export protein BRL1 OS=Sac...1370.00000003     56.2     25     47GO:0005783; C:endoplasmic reticulum; IDA:SGD.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0006406; P:mRNA export from nucleus; IMP:SGD.::GO:0006998; P:nuclear envelope organization; IMP:SGD.::GO:0006611; P:protein export from nucleus; IMP:SGD.
4Q9MUK8    652   NU5C_MESVI NAD(P)H-quinone oxidoreductase sub...478     30.8     36     53GO:0009535; C:chloroplast thylakoid membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008137; F:NADH dehydrogenase (ubiquinone) activity; IEA:InterPro.::GO:0048038; F:quinone binding; IEA:UniProtKB-KW.
GO:0042773; P:ATP synthesis coupled electron transport; IEA:InterPro.::GO:0006810; P:transport; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 4 1 - 4
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::