Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL246C
Length:
387
Number of sequences:
5887
Description:
YGL246C RAI1 SGDID:S000003215, Chr VII from 38780-37617, Genome Release 64-1-1, reverse complement, Verified ORF, "Nuclear protein with decapping endonuclease activity targeted toward mRNAs with unmethylated 7-methylguanosine cap structures; binds to and stabilizes the exoribonuclease Rat1p; required for pre-rRNA processing; homologous to human DOM3Z"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P53063    387   DOM3Z_YEAST RAT1-interacting protein OS=Sacch...3870     800     100     100GO:0005634; C:nucleus; IDA:SGD.
GO:0030234; F:enzyme regulator activity; IDA:SGD.::GO:0050072; F:m7G(5')pppN diphosphatase activity; IDA:SGD.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0000290; P:deadenylation-dependent decapping of nuclear-transcribed mRNA; IDA:SGD.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0030846; P:termination of RNA polymerase II transcription, poly(A)-coupled; IMP:SGD.
2Q6FWY5    400   DOM3Z_CANGA Protein RAI1 OS=NRRL Y-65) (Yeast...3930     524     62     80GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
3Q6CNF8    384   DOM3Z_KLULA Protein RAI1 OS=1267 / NRRL Y-114...3915e-176     503     62     77GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
4Q6BLU6    385   DOM3Z_DEBHA Protein RAI1 OS=0083 / IGC 2968) ...3849e-88     277     39     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
5Q5AAT0    391   DOM3Z_CANAL Protein RAI1 OS=Candida albicans ...3991e-86     274     38     60GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
6Q6C4A3    349   DOM3Z_YARLI Protein RAI1 OS=lipolytica). GN=R...3701e-53     187     34     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
7Q4WDK5    365   DOM3Z_ASPFU Protein rai1 OS=A1100) (Aspergill...3753e-53     186     33     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
8Q5AYW6    357   DOM3Z_EMENI Protein rai1 OS=194 / M139) (Aspe...3774e-52     183     33     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
9Q4I613    368   DOM3Z_GIBZE Protein RAI1 OS=(Wheat head bligh...3745e-49     175     31     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
10Q9HE87    383   DOM3Z_NEUCR Protein rai-1 OS=1257 / FGSC 987)...3322e-42     157     33     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
11Q2GXY3    373   DOM3Z_CHAGB Protein RAI1 OS=6347 / NRRL 1970)...3786e-42     156     30     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
12O13836    352   DOM3Z_SCHPO Protein din1 OS=Schizosaccharomyc...3122e-32     129     29     48GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; ISS:PomBase.::GO:0030846; P:termination of RNA polymerase II transcription, poly(A)-coupled; ISS:PomBase.
13P0CN13    386   DOM3Z_CRYNB Protein RAI1 OS=(Filobasidiella n...2831e-18     90.1     24     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
14Q5HZT0    401   DOM3Z_XENLA Protein Dom3Z OS=Xenopus laevis (...3061e-18     90.1     25     44
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
15P0CN12    386   DOM3Z_CRYNJ Protein RAI1 OS=ATCC MYA-565) (Fi...2832e-18     89.4     24     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
16Q4P1Q7    480   DOM3Z_USTMA Protein RAI1 OS=Ustilago maydis (...2382e-17     87     28     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0006353; P:transcription termination, DNA-dependent; IEA:UniProtKB-KW.
17Q8RY73    544   DOM3Z_ARATH Protein Dom3z homolog, chloroplas...3213e-17     87     28     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
18Q5E9Y5    397   DOM3Z_BOVIN Protein Dom3Z OS=Bos taurus (Bovi...3065e-16     82.4     26     44
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
19O70348    397   DOM3Z_MOUSE Protein Dom3Z OS=Mus musculus (Mo...2910.000000000000009     79     25     43
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
20Q6MG77    397   DOM3Z_RAT Protein Dom3Z OS=Rattus norvegicus ...2910.0000000000001     75.5     25     43
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
21Q9VXA8    375   DOM3Z_DROME Protein Dom3Z OS=Drosophila melan...3950.0000000000008     72.8     26     44
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
22O77932    396   DOM3Z_HUMAN Protein Dom3Z OS=Homo sapiens (Hu...3060.000000000002     71.6     26     44
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
23Q10660    393   DOM3Z_CAEEL Protein dom-3 OS=Caenorhabditis e...2610.00002     49.7     26     43
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:UniProtKB-KW.
24Q80U04    707   PJA2_MOUSE E3 ubiquitin-protein ligase Praja-...804.1     33.5     23     48GO:0030054; C:cell junction; IEA:UniProtKB-KW.::GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; ISS:UniProtKB.::GO:0014069; C:postsynaptic density; IEA:UniProtKB-SubCell.::GO:0045211; C:postsynaptic membrane; IEA:UniProtKB-KW.
GO:0034236; F:protein kinase A catalytic subunit binding; ISS:UniProtKB.::GO:0034237; F:protein kinase A regulatory subunit binding; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007616; P:long-term memory; ISS:UniProtKB.::GO:0010738; P:regulation of protein kinase A signaling cascade; ISS:UniProtKB.
25Q06349    442   YD370_YEAST Uncharacterized protein YDR370C O...454.2     33.1     36     56GO:0005737; C:cytoplasm; IDA:SGD.
26Q04FB2    420   PROA_OENOB Gamma-glutamyl phosphate reductase...1074.5     33.1     28     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004350; F:glutamate-5-semialdehyde dehydrogenase activity; IEA:EC.::GO:0050661; F:NADP binding; IEA:InterPro.
GO:0006561; P:proline biosynthetic process; IEA:UniProtKB-KW.
records
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