Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL213C
Length:
397
Number of sequences:
5887
Description:
YGL213C SKI8 SGDID:S000003181, Chr VII from 91247-90054, Genome Release 64-1-1, reverse complement, Verified ORF, "Ski complex component and WD-repeat protein, mediates 3'-5' RNA degradation by the cytoplasmic exosome; also required for meiotic double-strand break recombination; null mutants have superkiller phenotype"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
211Q8VD65    1358   PI3R4_MOUSE Phosphoinositide 3-kinase regulat...920.36     37     28     48GO:0005770; C:late endosome; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
212P0CS48    473   PRP46_CRYNJ Pre-mRNA-splicing factor PRP46 OS...480.36     36.6     35     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
213P0C0R5    1358   PI3R4_RAT Phosphoinositide 3-kinase regulator...920.37     37     28     48GO:0005770; C:late endosome; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
214Q6PNB6    353   GBB5_RABIT Guanine nucleotide-binding protein...1180.37     36.6     26     45GO:0005634; C:nucleus; ISS:AgBase.::GO:0005886; C:plasma membrane; ISS:AgBase.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; ISS:AgBase.
215Q9VU68    608   WDR1_DROME Actin-interacting protein 1 OS=Dro...1330.38     36.6     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IDA:UniProtKB.
GO:0003779; F:actin binding; ISS:FlyBase.
GO:0030042; P:actin filament depolymerization; IMP:FlyBase.::GO:0001736; P:establishment of planar polarity; IMP:UniProtKB.::GO:0035317; P:imaginal disc-derived wing hair organization; IMP:FlyBase.::GO:0006911; P:phagocytosis, engulfment; IMP:FlyBase.::GO:0030834; P:regulation of actin filament depolymerization; IMP:UniProtKB.::GO:0045214; P:sarcomere organization; IMP:FlyBase.
216Q17N69    409   LIS1_AEDAE Lissencephaly-1 homolog OS=Aedes a...653.4     33.5     32     46GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
217P62881    395   GBB5_MOUSE Guanine nucleotide-binding protein...819.3     32     27     51GO:0005634; C:nucleus; IDA:MGI.::GO:0005886; C:plasma membrane; IDA:MGI.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; IDA:MGI.
218O14775    395   GBB5_HUMAN Guanine nucleotide-binding protein...819.1     32     27     51GO:0005834; C:heterotrimeric G-protein complex; NAS:UniProtKB.
GO:0003924; F:GTPase activity; NAS:UniProtKB.::GO:0004871; F:signal transducer activity; NAS:UniProtKB.
219Q9EPV5    1249   APAF_RAT Apoptotic protease-activating factor...1030.4     36.6     29     46GO:0043293; C:apoptosome; IDA:RGD.
GO:0043531; F:ADP binding; IEA:InterPro.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0031072; F:heat shock protein binding; IPI:RGD.::GO:0042802; F:identical protein binding; IDA:RGD.
GO:0007568; P:aging; IEP:RGD.::GO:0007420; P:brain development; IEP:RGD.::GO:0010659; P:cardiac muscle cell apoptotic process; IMP:RGD.::GO:0030154; P:cell differentiation; IEP:RGD.::GO:0071560; P:cellular response to transforming growth factor beta stimulus; IDA:RGD.::GO:0006952; P:defense response; IEA:InterPro.::GO:0034349; P:glial cell apoptotic process; IEP:RGD.::GO:0006917; P:induction of apoptosis; IDA:RGD.::GO:0051260; P:protein homooligomerization; IDA:RGD.::GO:0001666; P:response to hypoxia; IEP:RGD.::GO:0007584; P:response to nutrient; IEP:RGD.
220P62882    353   GBB5_RAT Guanine nucleotide-binding protein s...1180.41     36.2     26     45GO:0005834; C:heterotrimeric G-protein complex; TAS:RGD.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:RGD.
221Q80ZD0    353   GBB5_TAMST Guanine nucleotide-binding protein...1180.42     36.2     26     45
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
222Q5RDY7    353   GBB5_PONAB Guanine nucleotide-binding protein...1180.42     36.2     26     45
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
223O43017    380   SWD3_SCHPO Set1 complex component swd3 OS=Sch...1400.69     35.4     25     48GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0051568; P:histone H3-K4 methylation; IMP:PomBase.
224Q2GT28    453   LIS12_CHAGB Nuclear distribution protein PAC1...1280.43     36.2     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
225Q42384    486   PRL1_ARATH Protein pleiotropic regulatory loc...490.43     36.2     33     49GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0048825; P:cotyledon development; IMP:TAIR.::GO:0009870; P:defense response signaling pathway, resistance gene-dependent; IMP:TAIR.::GO:0010204; P:defense response signaling pathway, resistance gene-independent; IMP:TAIR.::GO:0042742; P:defense response to bacterium; IMP:TAIR.::GO:0050832; P:defense response to fungus; IMP:TAIR.::GO:0009755; P:hormone-mediated signaling pathway; IMP:TAIR.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0048366; P:leaf development; IMP:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:TAIR.::GO:0006508; P:proteolysis; IMP:TAIR.::GO:0009749; P:response to glucose stimulus; IMP:TAIR.::GO:0048364; P:root development; IMP:TAIR.::GO:0010182; P:sugar mediated signaling pathway; IMP:TAIR.
226Q7PS24    341   CIAO1_ANOGA Probable cytosolic iron-sulfur pr...2070.44     36.2     25     43
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
227Q5R9I3    1358   PI3R4_PONAB Phosphoinositide 3-kinase regulat...920.45     36.6     28     47GO:0005770; C:late endosome; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
228Q99570    1358   PI3R4_HUMAN Phosphoinositide 3-kinase regulat...920.45     36.6     28     47GO:0005829; C:cytosol; TAS:Reactome.::GO:0005770; C:late endosome; IDA:UniProtKB.
GO:0005524; F:ATP binding; NAS:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
GO:0045087; P:innate immune response; TAS:Reactome.::GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome.
229Q93847    395   YZLL_CAEEL Uncharacterized WD repeat-containi...1860.46     36.2     25     41
230Q54MZ3    499   CDC20_DICDI Anaphase-promoting complex subuni...1710.47     36.2     25     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
231P53011    349   SEH1_YEAST Nucleoporin SEH1 OS=Saccharomyces ...1230.47     36.2     33     46GO:0000329; C:fungal-type vacuole membrane; IDA:SGD.::GO:0031080; C:Nup107-160 complex; IDA:SGD.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0035859; C:Seh1-associated complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0006406; P:mRNA export from nucleus; TAS:SGD.::GO:0006609; P:mRNA-binding (hnRNP) protein import into nucleus; TAS:SGD.::GO:0006607; P:NLS-bearing substrate import into nucleus; TAS:SGD.::GO:0006999; P:nuclear pore organization; TAS:SGD.::GO:0006611; P:protein export from nucleus; TAS:SGD.::GO:0006610; P:ribosomal protein import into nucleus; TAS:SGD.::GO:0006407; P:rRNA export from nucleus; TAS:SGD.::GO:0006408; P:snRNA export from nucleus; TAS:SGD.::GO:0006608; P:snRNP protein import into nucleus; TAS:SGD.::GO:0006409; P:tRNA export from nucleus; TAS:SGD.
232P36408    347   GBB_DICDI Guanine nucleotide-binding protein ...1180.49     36.2     27     42GO:0005834; C:heterotrimeric G-protein complex; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0031682; F:G-protein gamma-subunit binding; IDA:dictyBase.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007190; P:activation of adenylate cyclase activity; TAS:dictyBase.::GO:0031152; P:aggregation involved in sorocarp development; IMP:dictyBase.::GO:0043327; P:chemotaxis to cAMP; IMP:dictyBase.::GO:0043326; P:chemotaxis to folate; IMP:dictyBase.::GO:0007188; P:G-protein signaling, coupled to cAMP nucleotide second messenger; IDA:dictyBase.::GO:0032320; P:positive regulation of Ras GTPase activity; IMP:dictyBase.::GO:0030826; P:regulation of cGMP biosynthetic process; TAS:dictyBase.
233Q8BU03    919   PWP2_MOUSE Periodic tryptophan protein 2 homo...437.1     32.7     40     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
234O61585    690   KTNB1_STRPU Katanin p80 WD40-containing subun...1344.4     33.1     22     37GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
235Q9USN3    777   UTP13_SCHPO Probable U3 small nucleolar RNA-a...1010.54     36.2     26     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
236Q16MY0    659   WDR48_AEDAE WD repeat-containing protein 48 h...1260.55     36.2     19     45
237P17343    340   GBB1_CAEEL Guanine nucleotide-binding protein...1190.57     35.8     26     44
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000132; P:establishment of mitotic spindle orientation; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0040013; P:negative regulation of locomotion; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0035046; P:pronuclear migration; IMP:WormBase.::GO:0046662; P:regulation of oviposition; IMP:WormBase.
238Q61ZF6    340   GBB1_CAEBR Guanine nucleotide-binding protein...1190.57     35.8     26     44
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
239P79147    340   GBB3_CANFA Guanine nucleotide-binding protein...1200.61     35.8     28     44GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
240Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...1063     33.5     27     42GO:0005730; C:nucleolus; IDA:HPA.
241Q5DFU0    352   CIAO1_SCHJA Probable cytosolic iron-sulfur pr...1160.64     35.8     26     47
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
records
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