Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL207W
Length:
1035
Number of sequences:
5887
Description:
YGL207W SPT16 SGDID:S000003175, Chr VII from 98969-102076, Genome Release 64-1-1, Verified ORF, "Subunit of the heterodimeric FACT complex (Spt16p-Pob3p), which associates with chromatin via interaction with Nhp6Ap and Nhp6Bp, and reorganizes nucleosomes to facilitate access to DNA by RNA and DNA polymerases"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q5R8I2    244   CN166_PONAB UPF0568 protein C14orf166 homolog...1143.3     34.7     29     44GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.::GO:0072669; C:tRNA-splicing ligase complex; ISS:UniProtKB.
GO:0000993; F:RNA polymerase II core binding; ISS:UniProtKB.
GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
62Q9Y224    244   CN166_HUMAN UPF0568 protein C14orf166 OS=Homo...1143.3     34.7     29     44GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:HPA.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.::GO:0072669; C:tRNA-splicing ligase complex; IDA:UniProtKB.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0000993; F:RNA polymerase II core binding; IDA:UniProtKB.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
63A7GR98    649   MUTL_BACCN DNA mismatch repair protein mutL O...883.3     35.4     30     52
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0030983; F:mismatched DNA binding; IEA:InterPro.
GO:0006298; P:mismatch repair; IEA:InterPro.
64A1CNW6    492   AMPP2_ASPCL Probable Xaa-Pro aminopeptidase A...634     35     32     49
GO:0004177; F:aminopeptidase activity; IEA:UniProtKB-KW.::GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0008237; F:metallopeptidase activity; IEA:UniProtKB-KW.
GO:0009987; P:cellular process; IEA:InterPro.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
65Q4L749    351   Y1217_STAHJ Uncharacterized peptidase SH1217 ...374.5     34.7     43     62
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0009987; P:cellular process; IEA:InterPro.
66Q9Y7M8    502   YNTB_SCHPO Probable RNA exonuclease C9B6.11c ...946.3     34.3     31     45GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0004521; F:endoribonuclease activity; ISS:PomBase.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; ISS:PomBase.
67Q2YTD2    351   Y1567_STAAB Uncharacterized peptidase SAB1567...647     33.9     31     55
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0009987; P:cellular process; IEA:InterPro.
records
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