Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL174W
Length:
266
Number of sequences:
5887
Description:
YGL174W BUD13 SGDID:S000003142, Chr VII from 174545-175345, Genome Release 64-1-1, Verified ORF, "Subunit of the RES complex, which is required for nuclear pre-mRNA retention and splicing; involved in bud-site selection; diploid mutants display a unipolar budding pattern instead of the wild-type bipolar pattern"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P46947    266   CWC26_YEAST Pre-mRNA-splicing factor CWC26 OS...2660     545     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0070274; C:RES complex; IDA:SGD.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000282; P:cellular bud site selection; IMP:SGD.::GO:0006406; P:mRNA export from nucleus; IMP:SGD.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:SGD.
2Q6FL63    235   CWC26_CANGA Pre-mRNA-splicing factor CWC26 OS...2747e-34     128     34     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
3Q75AG5    270   CWC26_ASHGO Pre-mRNA-splicing factor CWC26 OS...2861e-33     128     35     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
4Q6CJ08    268   CWC26_KLULA Pre-mRNA-splicing factor CWC26 OS...2182e-25     106     35     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
5Q6BU18    268   CWC26_DEBHA Pre-mRNA-splicing factor CWC26 OS...1740.00000000000008     72.4     33     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
6Q6CAX1    221   CWC26_YARLI Pre-mRNA-splicing factor CWC26 OS...1610.0000000000004     69.7     33     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
7Q5AWZ6    345   CWC26_EMENI Pre-mRNA-splicing factor cwc26 OS...1610.0000000000007     70.9     33     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
8Q4W9Z9    344   CWC26_ASPFU Pre-mRNA-splicing factor cwc26 OS...1720.000000000001     70.5     33     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
9O94417    306   CWC26_SCHPO Pre-mRNA-splicing factor cwf26 OS...2090.00000000003     65.9     29     44GO:0005829; C:cytosol; IDA:PomBase.::GO:0005681; C:spliceosomal complex; IDA:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IC:PomBase.
10Q7RWR8    377   CWC26_NEUCR Pre-mRNA-splicing factor cwc-26 O...1650.000000002     60.8     33     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
11Q5ZIJ0    559   BUD13_CHICK BUD13 homolog OS=Gallus gallus (C...680.00000006     56.6     44     56
12Q4PI72    339   CWC26_USTMA Pre-mRNA-splicing factor CWC26 OS...1550.00000006     56.2     30     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
13Q4QQU1    636   BUD13_RAT BUD13 homolog OS=Rattus norvegicus ...580.00000008     56.6     48     57
14P0CN00    331   CWC26_CRYNJ Pre-mRNA-splicing factor CWC26 OS...360.00000008     55.8     64     72GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
15P0CN01    331   CWC26_CRYNB Pre-mRNA-splicing factor CWC26 OS...360.00000008     55.8     64     72GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
16Q9BRD0    619   BUD13_HUMAN BUD13 homolog OS=Homo sapiens (Hu...580.00000009     56.2     48     55GO:0070274; C:RES complex; ISS:BHF-UCL.
GO:0006406; P:mRNA export from nucleus; ISS:BHF-UCL.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:BHF-UCL.
17Q52F10    352   CWC26_MAGO7 Pre-mRNA-splicing factor CWC26 OS...1630.0000003     54.3     28     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043581; P:mycelium development; IEP:PAMGO_MGG.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
18Q8R149    637   BUD13_MOUSE BUD13 homolog OS=Mus musculus (Mo...580.0000005     53.9     47     55
19Q5AL13    281   CWC26_CANAL Pre-mRNA-splicing factor CWC26 OS...780.00001     49.3     37     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
20P30640    458   BUD13_CAEEL BUD13 homolog OS=Caenorhabditis e...290.00009     47     66     69
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0045132; P:meiotic chromosome segregation; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
21O22928    510   PUSH_ARATH Putative tRNA pseudouridine syntha...1122.5     33.1     28     48
GO:0009982; F:pseudouridine synthase activity; TAS:TAIR.::GO:0003723; F:RNA binding; IEA:InterPro.
GO:0001522; P:pseudouridine synthesis; IEA:InterPro.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
22Q47NZ5    249   PSA_THEFY Proteasome subunit alpha OS=Thermob...932.9     32.7     29     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0019773; C:proteasome core complex, alpha-subunit complex; IEA:InterPro.
GO:0004298; F:threonine-type endopeptidase activity; IEA:UniProtKB-KW.
GO:0051603; P:proteolysis involved in cellular protein catabolic process; IEA:InterPro.
23A6QLR4    428   FLOT2_BOVIN Flotillin-2 OS=Bos taurus (Bovine...1108.7     31.2     25     48GO:0005901; C:caveola; IEA:UniProtKB-SubCell.::GO:0030139; C:endocytic vesicle; ISS:UniProtKB.::GO:0005768; C:endosome; ISS:UniProtKB.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 23 1 - 23
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::