Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL172W
Length:
472
Number of sequences:
5887
Description:
YGL172W NUP49 SGDID:S000003140, Chr VII from 180700-182118, Genome Release 64-1-1, Verified ORF, "Subunit of the Nsp1p-Nup57p-Nup49p-Nic96p subcomplex of the nuclear pore complex (NPC), required for nuclear export of ribosomes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q02199    472   NUP49_YEAST Nucleoporin NUP49/NSP49 OS=Saccha...4720     931     100     100GO:0055125; C:Nic96 complex; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0006409; P:tRNA export from nucleus; IMP:SGD.
2Q09793    425   NUP45_SCHPO Nucleoporin nup45 OS=Schizosaccha...4941e-30     126     32     45GO:0005737; C:cytoplasm; IDA:PomBase.::GO:0031965; C:nuclear membrane; IDA:PomBase.::GO:0005643; C:nuclear pore; TAS:PomBase.
GO:0051301; P:cell division; IMP:PomBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006913; P:nucleocytoplasmic transport; TAS:PomBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
3Q02630    1113   NU116_YEAST Nucleoporin NUP116/NSP116 OS=Sacc...1522.5     34.7     39     51GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0055126; C:Nup82 complex; IDA:SGD.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0006999; P:nuclear pore organization; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0006409; P:tRNA export from nucleus; IMP:SGD.
4P48837    541   NUP57_YEAST Nucleoporin NUP57 OS=Saccharomyce...2400.000000000000004     81.3     40     48GO:0055125; C:Nic96 complex; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006999; P:nuclear pore organization; IMP:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.
5Q54EQ8    2053   NUP98_DICDI Nuclear pore complex protein Nup9...1620.0001     48.9     40     48GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; ISS:dictyBase.
GO:0005215; F:transporter activity; ISS:dictyBase.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006913; P:nucleocytoplasmic transport; ISS:dictyBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
6G5EEH9    1678   NUP98_CAEEL Nuclear pore complex protein Nup9...1320.0001     48.5     37     51GO:0005643; C:nuclear pore; IEA:InterPro.::GO:0043186; C:P granule; IDA:WormBase.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040039; P:inductive cell migration; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006997; P:nucleus organization; IMP:WormBase.::GO:0006810; P:transport; IEA:InterPro.
7Q02629    959   NU100_YEAST Nucleoporin NUP100/NSP100 OS=Sacc...1290.93     35.8     38     50GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0031990; P:mRNA export from nucleus in response to heat stress; IMP:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
8P49687    1317   NU145_YEAST Nucleoporin NUP145 OS=Saccharomyc...880.76     36.2     41     53GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0031080; C:Nup107-160 complex; IDA:SGD.
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:SGD.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0050000; P:chromosome localization; IMP:SGD.::GO:0031081; P:nuclear pore distribution; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0000973; P:posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery; IMP:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0034398; P:telomere tethering at nuclear periphery; IMP:SGD.::GO:0006409; P:tRNA export from nucleus; IMP:SGD.
9P52948    1817   NUP98_HUMAN Nuclear pore complex protein Nup9...2110.017     41.6     32     43GO:0005829; C:cytosol; TAS:Reactome.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:ProtInc.::GO:0031080; C:Nup107-160 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0017056; F:structural constituent of nuclear pore; NAS:UniProtKB.::GO:0005215; F:transporter activity; TAS:ProtInc.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0006260; P:DNA replication; IMP:UniProtKB.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006999; P:nuclear pore organization; NAS:UniProtKB.::GO:0000059; P:protein import into nucleus, docking; NAS:UniProtKB.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
10P49793    1816   NUP98_RAT Nuclear pore complex protein Nup98-...2700.001     45.4     32     39GO:0005654; C:nucleoplasm; IDA:RGD.::GO:0031080; C:Nup107-160 complex; ISS:UniProtKB.
GO:0042277; F:peptide binding; IDA:RGD.::GO:0005515; F:protein binding; IPI:RGD.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0000059; P:protein import into nucleus, docking; IMP:RGD.
11Q9UTK4    1778   NU189_SCHPO Nucleoporin nup189 OS=Schizosacch...3126.6     33.1     31     39GO:0031965; C:nuclear membrane; IDA:PomBase.::GO:0031080; C:Nup107-160 complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0051301; P:cell division; IMP:PomBase.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006997; P:nucleus organization; IMP:PomBase.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006407; P:rRNA export from nucleus; ISS:PomBase.
12P40477    1460   NU159_YEAST Nucleoporin NUP159 OS=Saccharomyc...1000.038     40.4     36     50GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0055126; C:Nup82 complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; TAS:SGD.
GO:0097064; P:ncRNA export from nucleus; IMP:SGD.::GO:0031081; P:nuclear pore distribution; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:SGD.::GO:0006611; P:protein export from nucleus; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0000056; P:ribosomal small subunit export from nucleus; IMP:SGD.
13Q555D2    1839   Y6503_DICDI Uncharacterized protein DDB_G0274...410.056     40     61     66
14D3ZHV2    5430   MACF1_RAT Microtubule-actin cross-linking fac...2210.5     37     23     41GO:0005794; C:Golgi apparatus; ISS:UniProtKB.::GO:0005874; C:microtubule; ISS:UniProtKB.::GO:0032587; C:ruffle membrane; ISS:UniProtKB.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:UniProtKB.::GO:0005509; F:calcium ion binding; IEA:InterPro.
GO:0007050; P:cell cycle arrest; IEA:InterPro.::GO:0043001; P:Golgi to plasma membrane protein transport; ISS:UniProtKB.::GO:0030177; P:positive regulation of Wnt receptor signaling pathway; IMP:UniProtKB.::GO:0010632; P:regulation of epithelial cell migration; ISS:UniProtKB.::GO:0051893; P:regulation of focal adhesion assembly; ISS:UniProtKB.::GO:0032886; P:regulation of microtubule-based process; ISS:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.::GO:0042060; P:wound healing; ISS:UniProtKB.
15Q80U93    2085   NU214_MOUSE Nuclear pore complex protein Nup2...2421.2     35.4     30     42GO:0005643; C:nuclear pore; TAS:MGI.
GO:0005487; F:nucleocytoplasmic transporter activity; IMP:MGI.
GO:0006406; P:mRNA export from nucleus; IMP:MGI.::GO:0006606; P:protein import into nucleus; IMP:MGI.::GO:0051726; P:regulation of cell cycle; IMP:MGI.
16P49790    1475   NU153_HUMAN Nuclear pore complex protein Nup1...2111.3     35.4     31     42GO:0005737; C:cytoplasm; IDA:HPA.::GO:0031965; C:nuclear membrane; IDA:HPA.::GO:0005643; C:nuclear pore; TAS:ProtInc.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005215; F:transporter activity; TAS:ProtInc.
GO:0005975; P:carbohydrate metabolic process; TAS:Reactome.::GO:0019221; P:cytokine-mediated signaling pathway; TAS:Reactome.::GO:0015758; P:glucose transport; TAS:Reactome.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0010827; P:regulation of glucose transport; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0055085; P:transmembrane transport; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
17Q61043    2035   NIN_MOUSE Ninein OS=Mus musculus (Mouse). GN=...1471.3     35.4     25     46GO:0005814; C:centriole; IDA:MGI.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0019900; F:kinase binding; IPI:MGI.
GO:0090222; P:centrosome-templated microtubule nucleation; IMP:MGI.::GO:0034454; P:microtubule anchoring at centrosome; IMP:MGI.
18A9KNW4    1131   IF2_CLOPH Translation initiation factor IF-2 ...2001.3     35.4     24     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
19Q9V6B9    610   NUP54_DROME Probable nucleoporin Nup54 OS=Dro...2092.8     34.3     33     44GO:0005643; C:nuclear pore; ISS:UniProtKB.
GO:0005487; F:nucleocytoplasmic transporter activity; ISS:UniProtKB.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006607; P:NLS-bearing substrate import into nucleus; IMP:FlyBase.
20Q6YXY2    1668   HACL1_ORYSJ Probable histone acetyltransferas...2563.1     34.3     22     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004402; F:histone acetyltransferase activity; IEA:EC.::GO:0003712; F:transcription cofactor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
21P14907    823   NSP1_YEAST Nucleoporin NSP1 OS=Saccharomyces ...933.3     33.9     35     53GO:0055125; C:Nic96 complex; IDA:SGD.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0055126; C:Nup82 complex; IDA:SGD.
GO:0005543; F:phospholipid binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0017056; F:structural constituent of nuclear pore; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0097064; P:ncRNA export from nucleus; IMP:SGD.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IGI:SGD.::GO:0006606; P:protein import into nucleus; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0000056; P:ribosomal small subunit export from nucleus; IMP:SGD.::GO:0006409; P:tRNA export from nucleus; IMP:SGD.
22Q10168    598   NSP1_SCHPO Nucleoporin nsp1 OS=Schizosaccharo...644     33.9     47     58GO:0031965; C:nuclear membrane; IDA:PomBase.::GO:0005643; C:nuclear pore; IDA:PomBase.
GO:0017056; F:structural constituent of nuclear pore; IEA:InterPro.
GO:0000917; P:barrier septum assembly; IEA:UniProtKB-KW.::GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0000054; P:ribosomal subunit export from nucleus; ISS:PomBase.
23Q9GYZ0    1463   KIF15_STRPU Kinesin-like protein KIF15 OS=Str...1334.2     33.9     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0007018; P:microtubule-based movement; IEA:InterPro.
24P0AF61    98   YJDK_ECOLI Uncharacterized protein yjdK OS=Es...374.3     31.6     46     62
25P0AF62    98   YJDK_ECO57 Uncharacterized protein yjdK OS=Es...374.3     31.6     46     62
26Q2KIZ9    358   CCDB1_BOVIN Cyclin-D1-binding protein 1 OS=Bo...515.4     33.1     35     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.
records
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