Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL171W
Length:
564
Number of sequences:
5887
Description:
YGL171W ROK1 SGDID:S000003139, Chr VII from 182390-184084, Genome Release 64-1-1, Verified ORF, "ATP-dependent RNA helicase of the DEAD box family; required for 18S rRNA synthesis"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
661Q5RE47    428   DX39B_PONAB Spliceosome RNA helicase DDX39B O...4207e-42     160     29     48GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
662Q29024    428   DX39B_PIG Spliceosome RNA helicase DDX39B OS=...4207e-42     160     29     48GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
663P60024    428   DX39B_PANTR Spliceosome RNA helicase DDX39B O...4207e-42     160     29     48GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
664Q5TM17    428   DX39B_MACMU Spliceosome RNA helicase DDX39B O...4207e-42     160     29     48GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
665Q13838    428   DX39B_HUMAN Spliceosome RNA helicase DDX39B O...4207e-42     160     29     48GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IDA:BHF-UCL.::GO:0000346; C:transcription export complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0043008; F:ATP-dependent protein binding; IDA:BHF-UCL.::GO:0004004; F:ATP-dependent RNA helicase activity; IDA:UniProtKB.::GO:0030621; F:U4 snRNA binding; IDA:BHF-UCL.::GO:0017070; F:U6 snRNA binding; IDA:BHF-UCL.
GO:0046784; P:intronless viral mRNA export from host nucleus; IDA:UniProtKB.::GO:0010501; P:RNA secondary structure unwinding; IDA:BHF-UCL.::GO:0000245; P:spliceosomal complex assembly; IDA:BHF-UCL.
666Q5WR10    428   DX39B_CANFA Spliceosome RNA helicase DDX39B O...3847e-42     160     29     49GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
667Q9LUW6    610   RH9_ARATH DEAD-box ATP-dependent RNA helicase...3728e-42     162     30     51GO:0043234; C:protein complex; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IDA:TAIR.::GO:0003723; F:RNA binding; IDA:TAIR.
GO:0009409; P:response to cold; IEP:TAIR.::GO:0009651; P:response to salt stress; IMP:TAIR.::GO:0009414; P:response to water deprivation; IMP:TAIR.
668Q2UHC1    929   DBP10_ASPOR ATP-dependent RNA helicase dbp10 ...4288e-42     165     29     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
669Q1EB38    927   DBP10_COCIM ATP-dependent RNA helicase DBP10 ...4058e-42     165     29     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
670Q8GY84    456   RH10_ARATH DEAD-box ATP-dependent RNA helicas...4038e-42     160     30     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
671Q5A4P9    574   DBP9_CANAL ATP-dependent RNA helicase DBP9 OS...3969e-42     162     30     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
672Q66HG7    589   DDX59_RAT Probable ATP-dependent RNA helicase...3799e-42     162     30     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
673A4R5B8    914   DBP10_MAGO7 ATP-dependent RNA helicase DBP10 ...3871e-41     165     32     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
674Q6FNA2    969   DBP10_CANGA ATP-dependent RNA helicase DBP10 ...4151e-41     165     29     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
675Q9CAI7    414   IF4A3_ARATH Eukaryotic initiation factor 4A-3...3501e-41     159     31     50GO:0005829; C:cytosol; IDA:TAIR.::GO:0009505; C:plant-type cell wall; IDA:TAIR.::GO:0005774; C:vacuolar membrane; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
676Q8SR49    463   SPB4_ENCCU ATP-dependent rRNA helicase SPB4 O...3631e-41     160     32     51GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
677A7ESL7    920   DBP10_SCLS1 ATP-dependent RNA helicase dbp10 ...4391e-41     164     30     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
678Q6FML5    816   PRP5_CANGA Pre-mRNA-processing ATP-dependent ...4331e-41     164     29     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
679A7TJS7    607   SPB4_VANPO ATP-dependent rRNA helicase SPB4 O...3551e-41     162     33     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
680Q0D8N0    602   RH53_ORYSJ DEAD-box ATP-dependent RNA helicas...3841e-41     162     29     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
681Q887N8    397   RHLB_PSESM ATP-dependent RNA helicase rhlB OS...3682e-41     159     29     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
682Q5AF95    765   DBP4_CANAL ATP-dependent RNA helicase DBP4 OS...3642e-41     163     31     52GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
683A4STJ7    429   RHLB_AERS4 ATP-dependent RNA helicase rhlB OS...3602e-41     159     31     52
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
684Q8VDW0    427   DX39A_MOUSE ATP-dependent RNA helicase DDX39A...3842e-41     159     29     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
685Q6C7D2    605   HAS1_YARLI ATP-dependent RNA helicase HAS1 OS...3622e-41     161     31     53GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
686Q5U216    427   DX39A_RAT ATP-dependent RNA helicase DDX39A O...3842e-41     159     29     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
687A7ESL8    808   DBP4_SCLS1 ATP-dependent RNA helicase dbp4 OS...3472e-41     163     33     52GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
688Q2H2J1    825   DBP4_CHAGB ATP-dependent RNA helicase DBP4 OS...3392e-41     163     32     51GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
689A3LP87    445   DBP8_PICST ATP-dependent RNA helicase DBP8 OS...3802e-41     159     31     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
690Q2HFP1    397   IF4A_CHAGB ATP-dependent RNA helicase eIF4A O...3732e-41     158     32     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
691O76743    1156   GLH4_CAEEL ATP-dependent RNA helicase glh-4 O...4013e-41     164     30     52GO:0043186; C:P granule; IDA:WormBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0008432; F:JUN kinase binding; IPI:WormBase.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007276; P:gamete generation; IMP:WormBase.::GO:0042127; P:regulation of cell proliferation; IMP:WormBase.
records
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