Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL163C
Length:
898
Number of sequences:
5887
Description:
YGL163C RAD54 SGDID:S000003131, Chr VII from 196403-193707, Genome Release 64-1-1, reverse complement, Verified ORF, "DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q7ZU90    1026   CHD1L_DANRE Chromodomain-helicase-DNA-binding...5411e-52     203     29     47GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
92Q86WJ1    897   CHD1L_HUMAN Chromodomain-helicase-DNA-binding...4831e-52     201     30     49GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:HPA.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; TAS:UniProtKB.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006338; P:chromatin remodeling; IDA:UniProtKB.::GO:0006281; P:DNA repair; TAS:UniProtKB.
93P31380    1131   FUN30_YEAST Uncharacterized ATP-dependent hel...5672e-52     202     30     47GO:0031934; C:mating-type region heterochromatin; IPI:SGD.::GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003682; F:chromatin binding; IDA:SGD.::GO:0003677; F:DNA binding; IDA:SGD.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0042803; F:protein homodimerization activity; IDA:SGD.
GO:0000183; P:chromatin silencing at rDNA; IMP:SGD.::GO:0030466; P:chromatin silencing at silent mating-type cassette; IMP:SGD.::GO:0006348; P:chromatin silencing at telomere; IMP:SGD.::GO:0070869; P:heterochromatin assembly involved in chromatin silencing; IMP:SGD.::GO:0070870; P:heterochromatin maintenance involved in chromatin silencing; IMP:SGD.
94Q3B7N1    897   CHD1L_BOVIN Chromodomain-helicase-DNA-binding...4833e-52     201     30     49GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
95D3Z9Z9    1024   SMRCD_RAT SWI/SNF-related matrix-associated a...5196e-52     201     30     47GO:0000792; C:heterochromatin; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051304; P:chromosome separation; ISS:UniProtKB.::GO:0070932; P:histone H3 deacetylation; ISS:UniProtKB.::GO:0070933; P:histone H4 deacetylation; ISS:UniProtKB.
96Q8RWY3    1055   ISW2_ARATH Putative chromatin-remodeling comp...4756e-52     201     30     50GO:0016585; C:chromatin remodeling complex; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0031491; F:nucleosome binding; IEA:InterPro.
GO:0043044; P:ATP-dependent chromatin remodeling; IEA:InterPro.::GO:0016049; P:cell growth; IMP:TAIR.::GO:0009553; P:embryo sac development; IMP:TAIR.
97Q04692    1021   SMRCD_MOUSE SWI/SNF-related matrix-associated...5192e-51     199     30     47GO:0000792; C:heterochromatin; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051304; P:chromosome separation; ISS:UniProtKB.::GO:0070932; P:histone H3 deacetylation; ISS:UniProtKB.::GO:0070933; P:histone H4 deacetylation; ISS:UniProtKB.::GO:0000018; P:regulation of DNA recombination; ISS:UniProtKB.
98E1B7X9    1028   SMRCD_BOVIN SWI/SNF-related matrix-associated...5143e-51     198     30     47GO:0000792; C:heterochromatin; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051304; P:chromosome separation; ISS:UniProtKB.::GO:0070932; P:histone H3 deacetylation; ISS:UniProtKB.::GO:0070933; P:histone H4 deacetylation; ISS:UniProtKB.
99Q7G8Y3    1107   ISW2_ORYSJ Probable chromatin-remodeling comp...4984e-51     199     29     49GO:0016585; C:chromatin remodeling complex; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0031491; F:nucleosome binding; IEA:InterPro.
GO:0043044; P:ATP-dependent chromatin remodeling; IEA:InterPro.
100Q9H4L7    1026   SMRCD_HUMAN SWI/SNF-related matrix-associated...5156e-51     197     30     48GO:0000792; C:heterochromatin; ISS:UniProtKB.::GO:0016363; C:nuclear matrix; NAS:UniProtKB.::GO:0043596; C:nuclear replication fork; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006338; P:chromatin remodeling; NAS:UniProtKB.::GO:0051304; P:chromosome separation; IMP:UniProtKB.::GO:0070932; P:histone H3 deacetylation; IMP:UniProtKB.::GO:0070933; P:histone H4 deacetylation; IMP:UniProtKB.::GO:0009117; P:nucleotide metabolic process; NAS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; NAS:UniProtKB.::GO:0051260; P:protein homooligomerization; NAS:UniProtKB.::GO:0000018; P:regulation of DNA recombination; IEP:UniProtKB.
101Q9CXF7    900   CHD1L_MOUSE Chromodomain-helicase-DNA-binding...4821e-50     196     30     50GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
102Q9XFH4    764   DDM1_ARATH ATP-dependent DNA helicase DDM1 OS...4811e-49     191     30     50GO:0000786; C:nucleosome; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; IMP:UniProtKB.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0009294; P:DNA mediated transformation; IMP:TAIR.::GO:0006344; P:maintenance of chromatin silencing; IMP:UniProtKB.::GO:0006346; P:methylation-dependent chromatin silencing; IMP:TAIR.::GO:0090241; P:negative regulation of histone H4 acetylation; IMP:UniProtKB.::GO:0051574; P:positive regulation of histone H3-K9 methylation; IMP:UniProtKB.::GO:0044030; P:regulation of DNA methylation; IMP:UniProtKB.::GO:0006349; P:regulation of gene expression by genetic imprinting; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0032197; P:transposition, RNA-mediated; IMP:TAIR.
103O74842    1284   FFT2_SCHPO Uncharacterized ATP-dependent heli...5392e-47     187     30     49GO:0016585; C:chromatin remodeling complex; NAS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; NAS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; ISS:PomBase.::GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006338; P:chromatin remodeling; NAS:PomBase.
104Q6EVK6    2193   BRM_ARATH ATP-dependent helicase BRM OS=Arabi...4981e-46     185     30     50GO:0016585; C:chromatin remodeling complex; IDA:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IDA:TAIR.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0043044; P:ATP-dependent chromatin remodeling; NAS:TAIR.::GO:0010199; P:organ boundary specification between lateral organs and the meristem; IGI:TAIR.::GO:0040029; P:regulation of gene expression, epigenetic; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
105P87114    944   FFT1_SCHPO Uncharacterized ATP-dependent heli...5238e-44     175     29     49GO:0016585; C:chromatin remodeling complex; ISS:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006338; P:chromatin remodeling; ISS:PomBase.
106P94593    922   YWQA_BACSU Uncharacterized ATP-dependent heli...5041e-43     175     28     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
107O42861    922   YFC1_SCHPO Uncharacterized ATP-dependent heli...5345e-39     160     27     46GO:0016585; C:chromatin remodeling complex; ISS:PomBase.::GO:0000790; C:nuclear chromatin; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IDA:PomBase.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0032017; P:positive regulation of Ran protein signal transduction; IGI:PomBase.
108P47264    1031   Y018_MYCGE Uncharacterized ATP-dependent heli...4971e-38     159     28     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
109Q9GQN5    1311   ATRX_DROME Transcriptional regulator ATRX hom...1756e-26     119     34     59GO:0005722; C:beta-heterochromatin; IDA:FlyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IDA:FlyBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0007411; P:axon guidance; IMP:FlyBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0008347; P:glial cell migration; IMP:FlyBase.::GO:0070868; P:heterochromatin organization involved in chromatin silencing; IMP:FlyBase.::GO:0006917; P:induction of apoptosis; IMP:FlyBase.::GO:0046328; P:regulation of JNK cascade; IGI:FlyBase.
110P41447    506   GTA_NPVAC Probable global transactivator OS=A...5402e-37     152     25     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
111Q10332    830   YBMA_SCHPO Uncharacterized ATP-dependent heli...5877e-37     153     26     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0000113; C:nucleotide-excision repair factor 4 complex; ISS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; ISS:PomBase.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006289; P:nucleotide-excision repair; ISS:PomBase.
112Q61687    2476   ATRX_MOUSE Transcriptional regulator ATRX OS=...1963e-26     120     37     57GO:0000792; C:heterochromatin; IDA:MGI.::GO:0000228; C:nuclear chromosome; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003682; F:chromatin binding; IDA:MGI.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0030900; P:forebrain development; IMP:MGI.
113P75093    1030   Y020_MYCPN Uncharacterized ATP-dependent heli...4996e-35     147     27     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
114Q7YQM3    2492   ATRX_PONPY Transcriptional regulator ATRX OS=...1962e-26     120     37     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
115P46100    2492   ATRX_HUMAN Transcriptional regulator ATRX OS=...1962e-26     120     37     57GO:0005720; C:nuclear heterochromatin; TAS:ProtInc.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0070087; F:chromo shadow domain binding; IPI:BHF-UCL.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003678; F:DNA helicase activity; TAS:ProtInc.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006306; P:DNA methylation; TAS:ProtInc.::GO:0006310; P:DNA recombination; TAS:ProtInc.::GO:0006281; P:DNA repair; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; TAS:ProtInc.
116Q7YQM4    2492   ATRX_PANTR Transcriptional regulator ATRX OS=...1962e-26     120     37     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
117O10302    498   GTA_NPVOP Probable global transactivator OS=O...5098e-35     143     25     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
118Q9U7E0    1359   ATRX_CAEEL Transcriptional regulator ATRX hom...2055e-23     109     33     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0040025; P:vulval development; IMP:WormBase.
119A4HVU6    1098   JBP2_LEIIN Bifunctional helicase and thymine ...5143e-32     139     25     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0050341; F:thymine dioxygenase activity; IEA:EC.
120Q4QFY1    1098   JBP2_LEIMA Bifunctional helicase and thymine ...5089e-32     137     25     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0050341; F:thymine dioxygenase activity; IEA:EC.
121A4H7G5    1098   JBP2_LEIBR Bifunctional helicase and thymine ...5122e-31     136     24     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0050341; F:thymine dioxygenase activity; IEA:EC.
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