rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
211 | C3LR47 | 969 | RAPA_VIBCM RNA polymerase-associated protein ... | 499 | 0.000000002 | 65.5 | 22 | 40 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 212 | Q9KP70 | 969 | RAPA_VIBCH RNA polymerase-associated protein ... | 499 | 0.000000002 | 65.5 | 22 | 40 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 213 | A5F5C5 | 969 | RAPA_VIBC3 RNA polymerase-associated protein ... | 499 | 0.000000002 | 65.5 | 22 | 40 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 214 | Q149N8 | 1683 | SHPRH_HUMAN E3 ubiquitin-protein ligase SHPRH... | 111 | 0.07 | 40.8 | 30 | 44 | GO:0000786; C:nucleosome; IEA:InterPro.::GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro. | 215 | B2ZFP3 | 807 | SMAL1_DANRE SWI/SNF-related matrix-associated... | 186 | 0.0000007 | 57 | 27 | 43 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003678; F:DNA helicase activity; ISS:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; ISS:UniProtKB. | | | | | | | | | | GO:0001525; P:angiogenesis; IMP:ZFIN.::GO:0051216; P:cartilage development; IMP:ZFIN.::GO:0022402; P:cell cycle process; IMP:ZFIN.::GO:0016568; P:chromatin modification; IEA:InterPro.::GO:0048589; P:developmental growth; IMP:ZFIN.::GO:0010172; P:embryonic body morphogenesis; IMP:ZFIN.::GO:0030097; P:hemopoiesis; IMP:ZFIN.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB. | 216 | Q12RU8 | 968 | RAPA_SHEDO RNA polymerase-associated protein ... | 495 | 0.00000008 | 60.1 | 23 | 39 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 217 | Q9CK01 | 967 | RAPA_PASMU RNA polymerase-associated protein ... | 480 | 0.0000001 | 59.3 | 22 | 42 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 218 | Q7TPQ3 | 1674 | SHPRH_MOUSE E3 ubiquitin-protein ligase SHPRH... | 165 | 0.95 | 37 | 22 | 40 | GO:0000786; C:nucleosome; IEA:InterPro.::GO:0005634; C:nucleus; IEA:InterPro. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006334; P:nucleosome assembly; IEA:InterPro. | 219 | Q9NZC9 | 954 | SMAL1_HUMAN SWI/SNF-related matrix-associated... | 177 | 0.00001 | 53.1 | 26 | 45 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003678; F:DNA helicase activity; IMP:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; IMP:UniProtKB. | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB. | 220 | Q9UTL9 | 1375 | YIV5_SCHPO Uncharacterized ATP-dependent heli... | 175 | 0.019 | 42.7 | 26 | 42 | GO:0000790; C:nuclear chromatin; IC:PomBase. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006281; P:DNA repair; ISS:PomBase. | 221 | Q9HYT6 | 950 | RAPA_PSEAE RNA polymerase-associated protein ... | 506 | 0.0000006 | 57.4 | 21 | 41 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 222 | B7V6T4 | 950 | RAPA_PSEA8 RNA polymerase-associated protein ... | 506 | 0.0000006 | 57.4 | 21 | 41 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 223 | Q06554 | 1556 | IRC20_YEAST Uncharacterized ATP-dependent hel... | 156 | 0.0000008 | 57 | 24 | 51 | GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0045003; P:double-strand break repair via synthesis-dependent strand annealing; IMP:SGD. | 224 | A1JJG0 | 968 | RAPA_YERE8 RNA polymerase-associated protein ... | 502 | 0.000001 | 56.6 | 22 | 41 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 225 | Q498E7 | 960 | SMAL1_XENLA SWI/SNF-related matrix-associated... | 177 | 0.000001 | 56.2 | 27 | 46 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003678; F:DNA helicase activity; ISS:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; ISS:UniProtKB. | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB. | 226 | Q9TTA5 | 941 | SMAL1_BOVIN SWI/SNF-related matrix-associated... | 165 | 0.000002 | 55.5 | 28 | 46 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003678; F:DNA helicase activity; ISS:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; ISS:UniProtKB. | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB. | 227 | B4F769 | 910 | SMAL1_RAT SWI/SNF-related matrix-associated a... | 177 | 0.000003 | 55.1 | 27 | 45 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003678; F:DNA helicase activity; ISS:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; ISS:UniProtKB. | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB. | 228 | Q8BJL0 | 910 | SMAL1_MOUSE SWI/SNF-related matrix-associated... | 166 | 0.000008 | 53.5 | 28 | 46 | GO:0005634; C:nucleus; ISS:UniProtKB. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003678; F:DNA helicase activity; ISS:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; ISS:UniProtKB. | | | | | | | | | | GO:0016568; P:chromatin modification; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB. | 229 | Q3KGV8 | 948 | RAPA_PSEPF RNA polymerase-associated protein ... | 519 | 0.000008 | 53.5 | 22 | 41 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 230 | Q7MHE6 | 969 | RAPA_VIBVY RNA polymerase-associated protein ... | 185 | 0.48 | 38.1 | 21 | 45 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 231 | Q8DCG1 | 969 | RAPA_VIBVU RNA polymerase-associated protein ... | 185 | 1.1 | 36.6 | 21 | 44 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 232 | B1JKV7 | 968 | RAPA_YERPY RNA polymerase-associated protein ... | 502 | 0.00001 | 53.1 | 22 | 40 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 233 | Q66EN4 | 968 | RAPA_YERPS RNA polymerase-associated protein ... | 502 | 0.00001 | 53.1 | 22 | 40 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 234 | B2K4B3 | 968 | RAPA_YERPB RNA polymerase-associated protein ... | 502 | 0.00001 | 53.1 | 22 | 40 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 235 | A7FM96 | 968 | RAPA_YERP3 RNA polymerase-associated protein ... | 502 | 0.00001 | 53.1 | 22 | 40 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 236 | B2VGQ6 | 968 | RAPA_ERWT9 RNA polymerase-associated protein ... | 228 | 0.00001 | 53.1 | 25 | 46 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 237 | A7MSB2 | 969 | RAPA_VIBHB RNA polymerase-associated protein ... | 190 | 0.055 | 40.8 | 21 | 45 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 238 | Q9M1I1 | 1378 | FB304_ARATH F-box protein At3g54460 OS=Arabid... | 229 | 0.024 | 42.4 | 25 | 43 | GO:0009506; C:plasmodesma; IDA:TAIR. | | | | | | | | | | GO:0005524; F:ATP binding; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 239 | B0URM0 | 966 | RAPA_HAES2 RNA polymerase-associated protein ... | 481 | 0.00002 | 52.4 | 23 | 41 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 240 | A4TQB3 | 968 | RAPA_YERPP RNA polymerase-associated protein ... | 502 | 0.00002 | 52 | 22 | 40 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 241 | Q1CMQ6 | 968 | RAPA_YERPN RNA polymerase-associated protein ... | 502 | 0.00002 | 52 | 22 | 40 | | | | | | | | | | | GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. |