Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL137W
Length:
889
Number of sequences:
5887
Description:
YGL137W SEC27 SGDID:S000003105, Chr VII from 249869-249886,250087-252738, Genome Release 64-1-1, Verified ORF, "Essential beta'-coat protein of the COPI coatomer, involved in ER-to-Golgi and Golgi-to-ER transport; contains WD40 domains that mediate cargo selective interactions; 45% sequence identity to mammalian beta'-COP"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
391B4LJT7    331   CIAO1_DROVI Probable cytosolic iron-sulfur pr...1470.095     39.7     27     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
392Q9FLX9    473   NLE1_ARATH Notchless protein homolog OS=Arabi...1200.001     46.2     25     41GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
393P0CS46    712   PFS2_CRYNJ Polyadenylation factor subunit 2 O...2080.00000002     61.6     25     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
394O14435    359   GBB_CRYPA Guanine nucleotide-binding protein ...1531.7     35.8     27     43
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
395O45040    340   GBB1_HOMAM Guanine nucleotide-binding protein...830.4     37.7     29     47
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
396P93398    377   GBB2_TOBAC Guanine nucleotide-binding protein...3040.096     39.7     23     40
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
397Q9GZS3    305   WDR61_HUMAN WD repeat-containing protein 61 O...2180.0000003     56.6     25     42GO:0016593; C:Cdc73/Paf1 complex; IDA:UniProtKB.::GO:0055087; C:Ski complex; IDA:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0080182; P:histone H3-K4 trimethylation; IMP:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; IDA:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; IMP:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; IMP:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.
398P93340    326   GBLP_NICPL Guanine nucleotide-binding protein...2030.0000000009     64.7     27     44
399Q20636    356   GBB2_CAEEL Guanine nucleotide-binding protein...1330.077     40     21     42GO:0043025; C:neuronal cell body; IDA:WormBase.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007212; P:dopamine receptor signaling pathway; IMP:WormBase.::GO:0007631; P:feeding behavior; IMP:WormBase.::GO:0007213; P:G-protein coupled acetylcholine receptor signaling pathway; IMP:WormBase.::GO:0008277; P:regulation of G-protein coupled receptor protein signaling pathway; IGI:WormBase.::GO:0040012; P:regulation of locomotion; IMP:WormBase.::GO:0046662; P:regulation of oviposition; IMP:WormBase.::GO:0043051; P:regulation of pharyngeal pumping; IMP:WormBase.::GO:0032094; P:response to food; IMP:WormBase.
400Q9JMJ4    504   PRP19_RAT Pre-mRNA-processing factor 19 OS=Ra...1690.0008     46.6     22     43GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
401Q99KP6    504   PRP19_MOUSE Pre-mRNA-processing factor 19 OS=...1690.0008     46.6     22     43GO:0005811; C:lipid particle; IDA:MGI.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0001833; P:inner cell mass cell proliferation; IMP:MGI.::GO:0008610; P:lipid biosynthetic process; IDA:MGI.::GO:0045665; P:negative regulation of neuron differentiation; IDA:MGI.::GO:0048711; P:positive regulation of astrocyte differentiation; IDA:MGI.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; IMP:MGI.
402Q0UXP3    471   YTM1_PHANO Ribosome biogenesis protein YTM1 O...2760.0000000001     68.6     25     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
403P0CS47    713   PFS2_CRYNB Polyadenylation factor subunit 2 O...2080.00000003     61.2     25     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
404B4KTK4    331   CIAO1_DROMO Probable cytosolic iron-sulfur pr...1470.19     38.5     27     42
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
405Q54S79    942   WDR3_DICDI WD repeat-containing protein 3 hom...1030.015     42.7     24     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
406Q08706    341   GBB_LYMST Guanine nucleotide-binding protein ...830.9     36.6     28     46
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
407Q93134    316   GBLP_BIOGL Guanine nucleotide-binding protein...1660.000003     53.9     24     43
408Q9C1X1    854   PWP2_SCHPO Periodic tryptophan protein 2 homo...2556.3     34.3     24     36GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
409Q40687    380   GBB_ORYSJ Guanine nucleotide-binding protein ...990.11     39.7     28     47
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; IEP:Gramene.
410P93563    377   GBB_SOLTU Guanine nucleotide-binding protein ...2080.014     42.4     24     40
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
411Q61011    340   GBB3_MOUSE Guanine nucleotide-binding protein...830.042     40.8     28     49GO:0005834; C:heterotrimeric G-protein complex; TAS:MGI.
GO:0003924; F:GTPase activity; TAS:MGI.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:MGI.
412Q12220    943   UTP12_YEAST U3 small nucleolar RNA-associated...1270.33     38.5     24     43GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
413Q5R8K2    431   CSTF1_PONAB Cleavage stimulation factor subun...1740.0003     48.1     22     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
414P40968    455   PRP17_YEAST Pre-mRNA-processing factor 17 OS=...1670.13     39.3     20     43GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000350; P:generation of catalytic spliceosome for second transesterification step; IMP:SGD.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; IGI:SGD.::GO:0000348; P:nuclear mRNA branch site recognition; IGI:SGD.
415Q5GIS3    341   GBB_PINFU Guanine nucleotide-binding protein ...830.88     36.6     28     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
416B2VZH2    460   YTM1_PYRTR Ribosome biogenesis protein ytm1 O...2770.0000000003     67.4     25     40GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
417B4GDM7    335   CIAO1_DROPE Probable cytosolic iron-sulfur pr...1524     34.7     26     45
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
418Q292E8    335   CIAO1_DROPS Probable cytosolic iron-sulfur pr...1524.3     34.3     26     45
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
419P49027    334   GBLPA_ORYSJ Guanine nucleotide-binding protei...1010.76     36.6     25     41GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0050832; P:defense response to fungus; IMP:UniProtKB.::GO:0060267; P:positive regulation of respiratory burst; IMP:UniProtKB.
420Q08E38    504   PRP19_BOVIN Pre-mRNA-processing factor 19 OS=...1690.0008     46.6     22     43GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
421P25382    515   NLE1_YEAST Ribosome assembly protein 4 OS=Sac...1440.000005     53.5     27     45GO:0005730; C:nucleolus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
records
Previous ‹‹ ›› Next Total records: 1000 391 - 420
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::