Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL129C
Length:
450
Number of sequences:
5887
Description:
YGL129C RSM23 SGDID:S000003097, Chr VII from 269075-267723, Genome Release 64-1-1, reverse complement, Verified ORF, "Mitochondrial ribosomal protein of the small subunit, has similarity to mammalian apoptosis mediator proteins; null mutation prevents induction of apoptosis by overproduction of metacaspase Mca1p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q01163    450   RT23_YEAST 37S ribosomal protein S23, mitocho...4500     919     100     100GO:0005763; C:mitochondrial small ribosomal subunit; IPI:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IPI:SGD.
GO:0032543; P:mitochondrial translation; IC:SGD.
2O59677    476   RT23_SCHPO 37S ribosomal protein S23, mitocho...3100.000000000001     73.6     25     46GO:0005763; C:mitochondrial small ribosomal subunit; ISS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; ISS:PomBase.
GO:0032543; P:mitochondrial translation; NAS:PomBase.
3Q9ER88    391   RT29_MOUSE 28S ribosomal protein S29, mitocho...1190.14     38.1     24     46GO:0005761; C:mitochondrial ribosome; IEA:InterPro.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
GO:0008637; P:apoptotic mitochondrial changes; IDA:MGI.
4Q8MNV0    512   SPAST_CAEEL Probable spastin homolog spas-1 O...530.21     37.7     45     57GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.
GO:0005524; F:ATP binding; NAS:UniProtKB.::GO:0008017; F:microtubule binding; IDA:WormBase.::GO:0008568; F:microtubule-severing ATPase activity; NAS:UniProtKB.
GO:0001578; P:microtubule bundle formation; NAS:UniProtKB.::GO:0007019; P:microtubule depolymerization; IDA:WormBase.::GO:0051013; P:microtubule severing; IDA:UniProtKB.::GO:0048477; P:oogenesis; IMP:WormBase.::GO:0031117; P:positive regulation of microtubule depolymerization; IDA:UniProtKB.::GO:0034214; P:protein hexamerization; IDA:UniProtKB.::GO:0051260; P:protein homooligomerization; IDA:UniProtKB.::GO:0040025; P:vulval development; IMP:WormBase.
5O05209    745   VAT_THEAC VCP-like ATPase OS=NBRC 15155 / AMR...910.26     37.4     32     48
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
6Q7KN62    801   TERA_DROME Transitional endoplasmic reticulum...910.27     37.4     33     46GO:0045169; C:fusome; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; NAS:FlyBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006200; P:ATP catabolic process; IGI:FlyBase.::GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0016320; P:endoplasmic reticulum membrane fusion; ISS:FlyBase.::GO:0007029; P:endoplasmic reticulum organization; IMP:FlyBase.::GO:0030433; P:ER-associated protein catabolic process; IMP:FlyBase.::GO:0007030; P:Golgi organization; IMP:FlyBase.::GO:0000226; P:microtubule cytoskeleton organization; IMP:FlyBase.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0007317; P:regulation of pole plasm oskar mRNA localization; IMP:FlyBase.::GO:0006810; P:transport; IEA:UniProtKB-KW.
7Q1QY27    312   MIAA_CHRSD tRNA dimethylallyltransferase OS=1...750.36     36.6     32     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0052381; F:tRNA dimethylallyltransferase activity; IEA:EC.
GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
8P49951    1675   CLHC1_BOVIN Clathrin heavy chain 1 OS=Bos tau...580.47     37     34     52GO:0030132; C:clathrin coat of coated pit; IEA:InterPro.::GO:0030130; C:clathrin coat of trans-Golgi network vesicle; IEA:InterPro.::GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.::GO:0005739; C:mitochondrion; ISS:AgBase.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
9P11442    1675   CLH_RAT Clathrin heavy chain 1 OS=Rattus norv...580.48     37     34     52GO:0030132; C:clathrin coat of coated pit; IEA:InterPro.::GO:0030130; C:clathrin coat of trans-Golgi network vesicle; IEA:InterPro.::GO:0030669; C:clathrin-coated endocytic vesicle membrane; TAS:Reactome.::GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.::GO:0005624; C:membrane fraction; IDA:RGD.::GO:0005819; C:spindle; IDA:UniProtKB.::GO:0030315; C:T-tubule; IDA:RGD.
GO:0030506; F:ankyrin binding; IDA:RGD.::GO:0031072; F:heat shock protein binding; IDA:RGD.::GO:0042277; F:peptide binding; IDA:RGD.::GO:0008022; F:protein C-terminus binding; IPI:RGD.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0007030; P:Golgi organization; IMP:RGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0007067; P:mitosis; IMP:UniProtKB.::GO:0006898; P:receptor-mediated endocytosis; IMP:UniProtKB.
10Q68FD5    1675   CLH_MOUSE Clathrin heavy chain 1 OS=Mus muscu...580.48     36.6     34     52GO:0030132; C:clathrin coat of coated pit; IEA:InterPro.::GO:0030130; C:clathrin coat of trans-Golgi network vesicle; IEA:InterPro.::GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.::GO:0005739; C:mitochondrion; IDA:MGI.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
11Q00610    1675   CLH1_HUMAN Clathrin heavy chain 1 OS=Homo sap...580.49     36.6     34     52GO:0030132; C:clathrin coat of coated pit; IEA:InterPro.::GO:0030130; C:clathrin coat of trans-Golgi network vesicle; IEA:InterPro.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0042470; C:melanosome; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0005198; F:structural molecule activity; NAS:UniProtKB.
GO:0007411; P:axon guidance; TAS:Reactome.::GO:0016044; P:cellular membrane organization; TAS:Reactome.::GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0006886; P:intracellular protein transport; NAS:UniProtKB.::GO:0007067; P:mitosis; IMP:UniProtKB.::GO:0042059; P:negative regulation of epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0006892; P:post-Golgi vesicle-mediated transport; TAS:Reactome.::GO:0031623; P:receptor internalization; IMP:BHF-UCL.::GO:0033572; P:transferrin transport; IMP:BHF-UCL.
12A8XV40    542   SPAST_CAEBR Probable spastin homolog spas-1 O...440.63     36.2     45     59GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008568; F:microtubule-severing ATPase activity; IEA:EC.
GO:0034214; P:protein hexamerization; ISS:UniProtKB.::GO:0051260; P:protein homooligomerization; ISS:UniProtKB.
13P82922    397   RT29_BOVIN 28S ribosomal protein S29, mitocho...1190.85     35.4     24     46GO:0005761; C:mitochondrial ribosome; IEA:InterPro.::GO:0015935; C:small ribosomal subunit; IEA:InterPro.
14Q8TE96    717   DQX1_HUMAN ATP-dependent RNA helicase DQX1 OS...731     35.4     30     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
15O14126    438   PRS6A_SCHPO 26S protease regulatory subunit 6...911.2     35     30     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0008540; C:proteasome regulatory particle, base subcomplex; ISS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:PomBase.::GO:0004175; F:endopeptidase activity; ISS:PomBase.
GO:0007346; P:regulation of mitotic cell cycle; IC:PomBase.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:PomBase.
16Q5QY69    612   TMCA_IDILO tRNA(Met) cytidine acetyltransfera...412.9     33.9     41     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.::GO:0051392; F:tRNA N-acetyltransferase activity; IEA:InterPro.
GO:0051391; P:tRNA acetylation; IEA:InterPro.::GO:0002101; P:tRNA wobble cytosine modification; IEA:InterPro.
17Q7VJY3    859   CLPB_HELHP Chaperone protein ClpB OS=Helicoba...1593.3     33.9     29     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0019538; P:protein metabolic process; IEA:InterPro.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
18P54776    423   PRS6A_SOLLC 26S protease regulatory subunit 6...914     33.5     26     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0030163; P:protein catabolic process; IEA:InterPro.
19Q9P7D2    341   PPME1_SCHPO Protein phosphatase methylesteras...1174.3     33.1     25     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0004091; F:carboxylesterase activity; IEA:UniProtKB-KW.::GO:0051722; F:protein C-terminal methylesterase activity; ISS:PomBase.
20Q9KGG1    457   RADA_BACHD DNA repair protein RadA homolog OS...409.5     32.3     40     58
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003684; F:damaged DNA binding; IEA:InterPro.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
records
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