Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL120C
Length:
767
Number of sequences:
5887
Description:
YGL120C PRP43 SGDID:S000003088, Chr VII from 283937-281634, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA helicase in the DEAH-box family, functions in both RNA polymerase I and polymerase II transcript metabolism, involved in release of the lariat-intron from the spliceosome"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31P20095    876   PRP2_YEAST Pre-mRNA-splicing factor ATP-depen...6733e-175     533     43     64GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008186; F:RNA-dependent ATPase activity; IDA:SGD.
GO:0000349; P:generation of catalytic spliceosome for first transesterification step; IDA:SGD.
32Q9BKQ8    732   DHX35_CAEEL Probable ATP-dependent RNA helica...6611e-174     526     43     63
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
33Q80VY9    698   DHX33_MOUSE Putative ATP-dependent RNA helica...6473e-169     511     43     63GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; IDA:UniProtKB.
GO:0033613; F:activating transcription factor binding; IPI:UniProtKB.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0000182; F:rDNA binding; IDA:UniProtKB.
GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; IDA:UniProtKB.
34Q9H6R0    707   DHX33_HUMAN Putative ATP-dependent RNA helica...6498e-168     508     43     63GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0000182; F:rDNA binding; IDA:UniProtKB.
GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; IDA:UniProtKB.
35Q7L7V1    743   DHX32_HUMAN Putative pre-mRNA-splicing factor...7016e-157     481     38     60GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
36Q8BZS9    744   DHX32_MOUSE Putative pre-mRNA-splicing factor...6863e-155     476     38     60GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
37Q5XH12    748   DHX32_XENLA Putative pre-mRNA-splicing factor...6914e-155     476     38     59GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
38Q6PE54    779   DHX40_MOUSE Probable ATP-dependent RNA helica...7075e-155     477     39     59
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
39Q8IX18    779   DHX40_HUMAN Probable ATP-dependent RNA helica...6991e-154     476     39     59
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
40Q5R864    779   DHX40_PONAB Probable ATP-dependent RNA helica...6991e-154     476     39     59
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
41Q5XI69    779   DHX40_RAT Probable ATP-dependent RNA helicase...7075e-154     474     39     59
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
42P36009    735   DHR2_YEAST Probable ATP-dependent RNA helicas...6756e-153     470     40     59GO:0005730; C:nucleolus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003724; F:RNA helicase activity; IDA:SGD.
GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
43Q9HE06    647   YK99_SCHPO Putative pre-mRNA-splicing factor ...6351e-144     446     40     61GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:UniProtKB.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
44P45018    1304   HRPA_HAEIN ATP-dependent RNA helicase hrpA ho...6402e-128     420     38     58
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
45Q924H9    718   DQX1_MOUSE ATP-dependent RNA helicase DQX1 OS...7103e-127     403     35     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
46P43329    1300   HRPA_ECOLI ATP-dependent RNA helicase hrpA OS...6473e-126     414     36     58
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IMP:EcoCyc.
47Q8TE96    717   DQX1_HUMAN ATP-dependent RNA helicase DQX1 OS...7013e-116     374     35     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
48Q3ZBE0    719   DQX1_BOVIN ATP-dependent RNA helicase DQX1 OS...7131e-113     367     34     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
49Q9HDY4    1183   YK16_SCHPO Putative ATP-dependent RNA helicas...7411e-108     364     33     51GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0003724; F:RNA helicase activity; ISS:PomBase.
GO:0030490; P:maturation of SSU-rRNA; ISS:PomBase.
50Q14147    1143   DHX34_HUMAN Probable ATP-dependent RNA helica...5655e-106     356     37     56GO:0005622; C:intracellular; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
51Q9DBV3    1145   DHX34_MOUSE Probable ATP-dependent RNA helica...5652e-104     352     37     56GO:0005622; C:intracellular; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
52P0CE10    1787   Y4102_ARATH Putative uncharacterized protein ...7032e-101     348     34     52GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
53Q8VHK9    1001   DHX36_MOUSE Probable ATP-dependent RNA helica...7394e-98     332     32     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003725; F:double-stranded RNA binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:MGI.
GO:0043330; P:response to exogenous dsRNA; IMP:MGI.::GO:0009615; P:response to virus; IMP:MGI.
54Q9H2U1    1008   DHX36_HUMAN Probable ATP-dependent RNA helica...7381e-96     328     32     50GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IDA:HPA.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
55O94536    1327   UCP12_SCHPO Putative ATP-dependent RNA helica...7313e-88     308     31     50GO:0005829; C:cytosol; IDA:PomBase.
GO:0005524; F:ATP binding; ISS:PomBase.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:PomBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
56Q5ZI74    1231   DHX30_CHICK Putative ATP-dependent RNA helica...6812e-76     273     31     48GO:0042645; C:mitochondrial nucleoid; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003682; F:chromatin binding; ISS:UniProtKB.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
57Q68FK8    1262   DHX9_XENLA ATP-dependent RNA helicase A-like ...7201e-75     270     29     48GO:0070937; C:CRD-mediated mRNA stability complex; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
58Q06698    1435   YL419_YEAST Putative ATP-dependent RNA helica...6572e-75     271     29     50GO:0005739; C:mitochondrion; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
59O60114    1428   YG65_SCHPO Uncharacterized helicase C15C4.05 ...5952e-73     266     31     53GO:0005829; C:cytosol; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; ISS:PomBase.::GO:0004004; F:ATP-dependent RNA helicase activity; ISS:PomBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
60Q5R874    1269   DHX9_PONAB ATP-dependent RNA helicase A OS=Po...7103e-73     264     29     46GO:0070937; C:CRD-mediated mRNA stability complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.
61Q08211    1270   DHX9_HUMAN ATP-dependent RNA helicase A OS=Ho...7103e-73     264     29     46GO:0005813; C:centrosome; IDA:UniProtKB.::GO:0070937; C:CRD-mediated mRNA stability complex; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004003; F:ATP-dependent DNA helicase activity; TAS:ProtInc.::GO:0004004; F:ATP-dependent RNA helicase activity; TAS:ProtInc.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003725; F:double-stranded RNA binding; IEA:InterPro.::GO:0001085; F:RNA polymerase II transcription factor binding; IPI:BHF-UCL.
GO:0070934; P:CRD-mediated mRNA stabilization; IMP:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.
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