Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL100W
Length:
349
Number of sequences:
5887
Description:
YGL100W SEH1 SGDID:S000003068, Chr VII from 313234-314283, Genome Release 64-1-1, Verified ORF, "Nuclear pore protein of the conserved Nup84p complex (Nup84p, Nup85p, Nup120p, Nup145p, and Seh1p); part of the SEA (Seh1-associated) complex, a coatamer-related complex that associates dynamically with the vacuole; homologous to Sec13p; the Nup84 subcomplex has a role in transcription elongation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
481A2QPZ4    788   ERB1_ASPNC Ribosome biogenesis protein erb1 O...420.89     35.4     36     57GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
482Q9NYS7    404   WSB2_HUMAN WD repeat and SOCS box-containing ...920.89     35     35     54
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
483O18640    318   GBLP_DROME Guanine nucleotide-binding protein...1350.91     35     26     44GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.
GO:0042335; P:cuticle development; IMP:FlyBase.::GO:0007626; P:locomotory behavior; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:FlyBase.::GO:0048477; P:oogenesis; IMP:FlyBase.::GO:0018991; P:oviposition; IMP:FlyBase.::GO:0035220; P:wing disc development; IMP:FlyBase.
484Q92828    525   COR2A_HUMAN Coronin-2A OS=Homo sapiens (Human...900.91     35     30     47GO:0015629; C:actin cytoskeleton; IBA:RefGenome.::GO:0017053; C:transcriptional repressor complex; IDA:UniProtKB.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.::GO:0035556; P:intracellular signal transduction; TAS:ProtInc.
485Q1DRB6    843   ERB1_COCIM Ribosome biogenesis protein ERB1 O...300.91     35.4     50     70GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
486Q86VZ2    330   WDR5B_HUMAN WD repeat-containing protein 5B O...2510.94     34.7     21     39
487Q0V8J1    406   WSB2_BOVIN WD repeat and SOCS box-containing ...920.95     35     35     54
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
488A6RUL1    335   EIF3I_BOTFB Eukaryotic translation initiation...3402     33.9     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
489Q6NVM2    655   KTNB1_XENTR Katanin p80 WD40-containing subun...1322.6     33.9     27     49GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
490P42935    788   ELP2_YEAST Elongator complex protein 2 OS=Sac...650.98     35     29     55GO:0005737; C:cytoplasm; IDA:SGD.::GO:0033588; C:Elongator holoenzyme complex; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0032447; P:protein urmylation; IMP:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0002098; P:tRNA wobble uridine modification; IMP:SGD.
491Q01369    316   GBLP_NEUCR Guanine nucleotide-binding protein...1591     34.7     23     38
492A7EF03    335   EIF3I_SCLS1 Eukaryotic translation initiation...3402.7     33.5     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
493Q99J09    342   MEP50_MOUSE Methylosome protein 50 OS=Mus mus...781     34.7     31     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0060770; P:negative regulation of epithelial cell proliferation involved in prostate gland development; IMP:MGI.::GO:0008284; P:positive regulation of cell proliferation; IGI:MGI.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:MGI.::GO:0060528; P:secretory columnal luminar epithelial cell differentiation involved in prostate glandular acinus development; IMP:MGI.
494Q5RBZ2    342   MEP50_PONAB Methylosome protein 50 OS=Pongo a...781.1     34.7     31     47GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
495Q4I7L0    423   HAT2_GIBZE Histone acetyltransferase type B s...626     32.3     31     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
496Q5RE95    330   WDR5B_PONAB WD repeat-containing protein 5B O...2511.1     34.7     21     39
497Q94BM7    794   SPA4_ARATH Protein SPA1-RELATED 4 OS=Arabidop...381.1     35     39     66GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0004672; F:protein kinase activity; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
498Q6PAX7    607   WDR1B_XENLA WD repeat-containing protein 1-B ...801.1     35     34     50GO:0005884; C:actin filament; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0005886; C:plasma membrane; ISS:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; ISS:UniProtKB.
499Q9W7F2    607   WDR1A_XENLA WD repeat-containing protein 1-A ...801.2     34.7     34     50GO:0005884; C:actin filament; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; IDA:UniProtKB.
500Q6GPU3    711   DTLB_XENLA Denticleless protein homolog B OS=...2071.2     34.7     22     40GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; ISS:UniProtKB.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
501O88656    372   ARC1B_RAT Actin-related protein 2/3 complex s...961.2     34.7     22     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0030833; P:regulation of actin filament polymerization; IEA:InterPro.
502Q9W415    424   WUHO_DROME tRNA (guanine-N(7)-)-methyltransfe...781.3     34.7     26     51GO:0001674; C:female germ cell nucleus; IDA:UniProtKB.::GO:0001673; C:male germ cell nucleus; IDA:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IMP:FlyBase.::GO:0007283; P:spermatogenesis; IMP:FlyBase.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
503Q9WUM4    474   COR1C_MOUSE Coronin-1C OS=Mus musculus (Mouse...1281.3     34.7     24     47GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0000147; P:actin cortical patch assembly; TAS:MGI.::GO:0006909; P:phagocytosis; TAS:MGI.
504Q05946    817   UTP13_YEAST U3 small nucleolar RNA-associated...1365.9     32.7     24     47GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
505B7PY76    425   WDR12_IXOSC Ribosome biogenesis protein WDR12...1371.3     34.7     26     48GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
506Q4QR85    342   MEP50_RAT Methylosome protein 50 OS=Rattus no...781.3     34.3     31     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
507B3NXQ7    416   WUHO_DROER tRNA (guanine-N(7)-)-methyltransfe...781.3     34.7     26     51GO:0001674; C:female germ cell nucleus; ISS:UniProtKB.::GO:0001673; C:male germ cell nucleus; ISS:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; ISS:UniProtKB.::GO:0007283; P:spermatogenesis; ISS:UniProtKB.::GO:0008033; P:tRNA processing; IEA:UniProtKB-KW.
508Q5FVB6    396   WDR4_XENTR tRNA (guanine-N(7)-)-methyltransfe...851.4     34.3     26     47GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006400; P:tRNA modification; ISS:UniProtKB.
509Q9XSC3    912   WDR44_BOVIN WD repeat-containing protein 44 O...301.4     34.7     43     70GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
510Q5JSH3    913   WDR44_HUMAN WD repeat-containing protein 44 O...301.4     34.7     43     70GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
511Q9WV32    372   ARC1B_MOUSE Actin-related protein 2/3 complex...961.4     34.3     22     42GO:0005885; C:Arp2/3 protein complex; TAS:MGI.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0030833; P:regulation of actin filament polymerization; IEA:InterPro.
records
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