Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL100W
Length:
349
Number of sequences:
5887
Description:
YGL100W SEH1 SGDID:S000003068, Chr VII from 313234-314283, Genome Release 64-1-1, Verified ORF, "Nuclear pore protein of the conserved Nup84p complex (Nup84p, Nup85p, Nup120p, Nup145p, and Seh1p); part of the SEA (Seh1-associated) complex, a coatamer-related complex that associates dynamically with the vacuole; homologous to Sec13p; the Nup84 subcomplex has a role in transcription elongation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
421Q6FLI3    579   CAF4_CANGA CCR4-associated factor 4 homolog O...2460.22     37     26     42GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
422O88342    606   WDR1_MOUSE WD repeat-containing protein 1 OS=...1307.2     32.3     22     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
423Q9ULV4    474   COR1C_HUMAN Coronin-1C OS=Homo sapiens (Human...1280.26     37     25     47GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.::GO:0006909; P:phagocytosis; TAS:ProtInc.::GO:0007165; P:signal transduction; TAS:ProtInc.
424Q6C4I9    820   ERB1_YARLI Ribosome biogenesis protein ERB1 O...430.26     37     35     63GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
425O93277    609   WDR1_CHICK WD repeat-containing protein 1 OS=...800.26     37     35     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
426Q9UTC7    462   YIDC_SCHPO Uncharacterized WD repeat-containi...1762.5     33.5     26     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0046540; C:U4/U6 x U5 tri-snRNP complex; ISS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
427Q6PAC3    445   DCA13_MOUSE DDB1- and CUL4-associated factor ...1560.28     36.6     24     42GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
428Q6PFM9    677   WDR48_DANRE WD repeat-containing protein 48 O...1310.29     37     24     46GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
429Q8C0P5    524   COR2A_MOUSE Coronin-2A OS=Mus musculus (Mouse...1400.29     36.6     26     42GO:0015629; C:actin cytoskeleton; IBA:RefGenome.::GO:0017053; C:transcriptional repressor complex; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.
430O22212    554   PRP4_ARATH U4/U6 small nuclear ribonucleoprot...912     34.3     29     51GO:0016607; C:nuclear speck; IDA:TAIR.
GO:0001709; P:cell fate determination; IMP:TAIR.::GO:0007267; P:cell-cell signaling; IMP:TAIR.::GO:0009560; P:embryo sac egg cell differentiation; IMP:TAIR.::GO:0008380; P:RNA splicing; IEA:InterPro.
431Q4V7Y7    655   KTNB1_XENLA Katanin p80 WD40-containing subun...1640.31     36.6     27     47GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
432Q2KJH4    606   WDR1_BOVIN WD repeat-containing protein 1 OS=...1516.8     32.3     22     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
433O75083    606   WDR1_HUMAN WD repeat-containing protein 1 OS=...780.33     36.6     36     50GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005576; C:extracellular region; TAS:Reactome.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0030168; P:platelet activation; TAS:Reactome.::GO:0002576; P:platelet degranulation; TAS:Reactome.::GO:0007605; P:sensory perception of sound; TAS:ProtInc.
434Q4V8C4    328   WDR5B_RAT WD repeat-containing protein 5B OS=...2490.36     36.2     24     43
435Q96KV7    1748   WDR90_HUMAN WD repeat-containing protein 90 O...650.37     36.6     32     54
436P69104    318   GBLP_TRYBR Guanine nucleotide-binding protein...2950.38     36.2     25     38
437P69103    318   GBLP_TRYBB Guanine nucleotide-binding protein...2950.38     36.2     25     38
438P38011    319   GBLP_YEAST Guanine nucleotide-binding protein...1430.38     36.2     22     47GO:0022627; C:cytosolic small ribosomal subunit; IDA:SGD.
GO:0001965; F:G-protein alpha-subunit binding; IPI:SGD.::GO:0005092; F:GDP-dissociation inhibitor activity; IDA:SGD.::GO:0004871; F:signal transducer activity; IMP:SGD.
GO:0007186; P:G-protein coupled receptor signaling pathway; IMP:SGD.::GO:0010255; P:glucose mediated signaling pathway; IMP:SGD.::GO:0001403; P:invasive growth in response to glucose limitation; IMP:SGD.::GO:0017148; P:negative regulation of translation; IMP:SGD.
439Q2GTM8    341   EIF3I_CHAGB Eukaryotic translation initiation...371.2     34.7     38     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
440Q6FWT9    467   LIS1_CANGA Nuclear distribution protein PAC1 ...610.39     36.2     34     56GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
441Q5RKI0    606   WDR1_RAT WD repeat-containing protein 1 OS=Ra...780.4     36.2     36     50GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
442Q02793    397   SKI8_YEAST Antiviral protein SKI8 OS=Saccharo...1230.41     36.2     33     46GO:0000228; C:nuclear chromosome; IDA:SGD.::GO:0055087; C:Ski complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0070478; P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay; IMP:SGD.::GO:0070481; P:nuclear-transcribed mRNA catabolic process, non-stop decay; IMP:SGD.::GO:0006461; P:protein complex assembly; IMP:SGD.::GO:0065004; P:protein-DNA complex assembly; IMP:SGD.::GO:0007131; P:reciprocal meiotic recombination; IMP:SGD.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.
443Q6CG48    437   LIS1_YARLI Nuclear distribution protein PAC1 ...802.9     33.5     30     51GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
444O43379    1518   WDR62_HUMAN WD repeat-containing protein 62 O...930.42     36.6     26     53GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0000922; C:spindle pole; IDA:UniProtKB.
GO:0021987; P:cerebral cortex development; IMP:UniProtKB.::GO:0022008; P:neurogenesis; IMP:UniProtKB.
445Q9JMJ2    410   FBXW4_MOUSE F-box/WD repeat-containing protei...1420.42     36.2     27     45
GO:0051216; P:cartilage development; IMP:MGI.::GO:0042733; P:embryonic digit morphogenesis; IMP:MGI.::GO:0002053; P:positive regulation of mesenchymal cell proliferation; IMP:MGI.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
446P74598    348   Y1491_SYNY3 Uncharacterized WD repeat-contain...1431.1     34.7     22     49GO:0030288; C:outer membrane-bounded periplasmic space; IDA:UniProtKB.
447Q3U3T8    1523   WDR62_MOUSE WD repeat-containing protein 62 O...930.45     36.2     27     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0021987; P:cerebral cortex development; ISS:UniProtKB.
448O61585    690   KTNB1_STRPU Katanin p80 WD40-containing subun...2170.46     36.2     24     41GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
449O43017    380   SWD3_SCHPO Set1 complex component swd3 OS=Sch...1470.46     35.8     28     44GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:PomBase.
GO:0006338; P:chromatin remodeling; IC:PomBase.::GO:0051568; P:histone H3-K4 methylation; IMP:PomBase.
450Q5E9I7    342   MEP50_BOVIN Methylosome protein 50 OS=Bos tau...780.48     35.8     31     46GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
451Q55FR9    1221   COPA_DICDI Coatomer subunit alpha OS=Dictyost...360.48     36.2     36     67GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
records
Previous ‹‹ ›› Next Total records: 710 421 - 450
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::