Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL100W
Length:
349
Number of sequences:
5887
Description:
YGL100W SEH1 SGDID:S000003068, Chr VII from 313234-314283, Genome Release 64-1-1, Verified ORF, "Nuclear pore protein of the conserved Nup84p complex (Nup84p, Nup85p, Nup120p, Nup145p, and Seh1p); part of the SEA (Seh1-associated) complex, a coatamer-related complex that associates dynamically with the vacuole; homologous to Sec13p; the Nup84 subcomplex has a role in transcription elongation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241Q5BK30    415   WDR69_RAT Outer row dynein assembly protein 1...3080.013     40.8     23     40GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
242Q93847    395   YZLL_CAEEL Uncharacterized WD repeat-containi...1405.2     32.7     24     46
243Q29RH4    351   THOC3_BOVIN THO complex subunit 3 OS=Bos taur...1330.002     43.1     27     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
244O60336    1514   MABP1_HUMAN Mitogen-activated protein kinase-...1410.002     43.9     23     50
245Q8VE80    351   THOC3_MOUSE THO complex subunit 3 OS=Mus musc...1330.002     43.1     27     46
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
246Q96J01    351   THOC3_HUMAN THO complex subunit 3 OS=Homo sap...1330.002     43.1     27     46GO:0000346; C:transcription export complex; IDA:UniProtKB.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0046784; P:intronless viral mRNA export from host nucleus; IDA:UniProtKB.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
247Q6FQU2    534   YD156_CANGA WD repeat-containing protein CAGL...2040.002     43.5     26     45
248Q9P2H3    777   IFT80_HUMAN Intraflagellar transport protein ...1420.54     35.8     25     43GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
249Q39336    327   GBLP_BRANA Guanine nucleotide-binding protein...3235.3     32.3     22     40
250Q6PE01    358   SNR40_MOUSE U5 small nuclear ribonucleoprotei...1550.002     43.1     23     49
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
251P16649    713   TUP1_YEAST General transcriptional corepresso...1208.3     32.3     25     45GO:0017053; C:transcriptional repressor complex; IDA:SGD.
GO:0042393; F:histone binding; IDA:SGD.::GO:0042826; F:histone deacetylase binding; IDA:SGD.::GO:0036033; F:mediator complex binding; IDA:SGD.::GO:0080025; F:phosphatidylinositol-3,5-bisphosphate binding; IDA:SGD.::GO:0001191; F:RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription; IDA:SGD.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0043486; P:histone exchange; IMP:SGD.::GO:0035955; P:negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0001198; P:negative regulation of mating-type specific transcription from RNA polymerase II promoter; IMP:SGD.::GO:0000433; P:negative regulation of transcription from RNA polymerase II promoter by glucose; IMP:SGD.::GO:0007070; P:negative regulation of transcription from RNA polymerase II promoter during mitosis; IMP:SGD.::GO:0016584; P:nucleosome positioning; IDA:SGD.::GO:2000531; P:regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:2001020; P:regulation of response to DNA damage stimulus; IMP:SGD.::GO:0061418; P:regulation of transcription from RNA polymerase II promoter in response to hypoxia; IMP:SGD.::GO:0061392; P:regulation of transcription from RNA polymerase II promoter in response to osmotic stress; IMP:SGD.
252Q9VU65    391   POC1_DROME POC1 centriolar protein homolog OS...3490.003     43.1     22     41
GO:0051297; P:centrosome organization; IMP:FlyBase.
253D3TLL6    411   LIS1_GLOMM Lissencephaly-1 homolog OS=Glossin...801.3     34.7     28     50GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
254O88879    1249   APAF_MOUSE Apoptotic protease-activating fact...680.75     35.4     28     56GO:0005634; C:nucleus; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0043531; F:ADP binding; IEA:InterPro.::GO:0016505; F:apoptotic protease activator activity; IPI:MGI.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:MGI.
GO:0006952; P:defense response; IEA:InterPro.::GO:0006309; P:DNA fragmentation involved in apoptotic nuclear change; IGI:MGI.::GO:0030900; P:forebrain development; IMP:MGI.::GO:0001843; P:neural tube closure; IMP:MGI.::GO:0051402; P:neuron apoptotic process; IGI:MGI.::GO:0042981; P:regulation of apoptotic process; IEA:InterPro.
255A7EZJ5    452   CIAO1_SCLS1 Probable cytosolic iron-sulfur pr...2450.003     43.1     23     43
256Q55563    1693   Y163_SYNY3 Uncharacterized WD repeat-containi...1130.19     37.7     27     46
GO:0005488; F:binding; IEA:InterPro.
257Q5RFF8    485   NLE1_PONAB Notchless protein homolog 1 OS=Pon...3970.003     43.1     21     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
258P61480    423   WDR12_RAT Ribosome biogenesis protein WDR12 O...2680.003     42.7     27     44GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
259Q12510    522   YD156_YEAST WD repeat-containing protein YDL1...1810.003     43.1     27     48GO:0005737; C:cytoplasm; IDA:SGD.::GO:0000790; C:nuclear chromatin; IDA:SGD.
GO:0003677; F:DNA binding; IDA:SGD.
260A7EKM8    458   LIS1_SCLS1 Nuclear distribution protein PAC1 ...1710.28     36.6     25     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
261B6HP56    458   LIS11_PENCW Nuclear distribution protein nudF...2573     33.5     23     36GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
262Q9NVX2    485   NLE1_HUMAN Notchless protein homolog 1 OS=Hom...3870.004     42.7     22     39GO:0005730; C:nucleolus; IDA:HPA.
263Q8I0F4    419   LIS1_DICDI Lissencephaly-1 homolog OS=Dictyos...1691.3     34.7     22     41GO:0031592; C:centrosomal corona; IDA:dictyBase.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
GO:0045504; F:dynein heavy chain binding; IPI:dictyBase.::GO:0017048; F:Rho GTPase binding; IPI:dictyBase.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051642; P:centrosome localization; IMP:dictyBase.::GO:0051645; P:Golgi localization; IMP:dictyBase.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
264Q2TBP4    407   POC1A_BOVIN POC1 centriolar protein homolog A...3320.004     42.4     20     40GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.
265Q6GMD2    305   WDR61_XENLA WD repeat-containing protein 61 O...3140.004     42.4     25     45GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
266Q1LV15    415   WDR69_DANRE Outer row dynein assembly protein...1559.9     31.6     23     46GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
GO:0070286; P:axonemal dynein complex assembly; IMP:UniProtKB.::GO:0060285; P:ciliary cell motility; IMP:UniProtKB.::GO:0060271; P:cilium morphogenesis; IMP:UniProtKB.::GO:0007368; P:determination of left/right symmetry; IMP:UniProtKB.
267P0CS42    433   LIS1_CRYNJ Nuclear distribution protein PAC1 ...970.57     35.8     23     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
268P0CS43    433   LIS1_CRYNB Nuclear distribution protein PAC1 ...970.57     35.8     23     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
269Q8TC44    478   POC1B_HUMAN POC1 centriolar protein homolog B...3450.037     39.7     20     38GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.
GO:0042384; P:cilium assembly; IMP:UniProtKB.
270Q5RD06    451   POC1B_PONAB POC1 centriolar protein homolog B...3450.08     38.5     21     38GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.
GO:0042384; P:cilium assembly; ISS:UniProtKB.
271Q8K057    777   IFT80_MOUSE Intraflagellar transport protein ...320.92     35     44     63GO:0005813; C:centrosome; IDA:MGI.::GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
records
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