Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL100W
Length:
349
Number of sequences:
5887
Description:
YGL100W SEH1 SGDID:S000003068, Chr VII from 313234-314283, Genome Release 64-1-1, Verified ORF, "Nuclear pore protein of the conserved Nup84p complex (Nup84p, Nup85p, Nup120p, Nup145p, and Seh1p); part of the SEA (Seh1-associated) complex, a coatamer-related complex that associates dynamically with the vacuole; homologous to Sec13p; the Nup84 subcomplex has a role in transcription elongation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
211B6QC56    459   LIS11_PENMQ Nuclear distribution protein nudF...1901.7     34.3     23     36GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
212C5FWH1    461   LIS1_ARTOC Nuclear distribution protein PAC1 ...2480.094     38.1     23     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
213B3NSK1    680   WDR48_DROER WD repeat-containing protein 48 h...1570.0007     45.1     27     45
214B4P7H8    680   WDR48_DROYA WD repeat-containing protein 48 h...1570.0007     45.1     27     45
215B3MET8    667   WDR48_DROAN WD repeat-containing protein 48 h...1570.0007     45.1     26     45
216Q28YY2    680   WDR48_DROPS WD repeat-containing protein 48 h...1570.0007     45.1     27     45
217B4GIJ0    680   WDR48_DROPE WD repeat-containing protein 48 h...1570.0007     45.1     27     45
218B2AEZ5    464   LIS11_PODAN Nuclear distribution protein PAC1...1390.0008     44.7     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
219B8P4B0    438   LIS11_POSPM Nuclear distribution protein PAC1...993     33.5     28     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
220B2B766    468   LIS12_PODAN Nuclear distribution protein PAC1...1560.0009     44.7     26     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
221O24456    327   GBLPA_ARATH Guanine nucleotide-binding protei...1580.001     44.3     26     42GO:0009507; C:chloroplast; IDA:TAIR.::GO:0022626; C:cytosolic ribosome; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0071215; P:cellular response to abscisic acid stimulus; IEP:TAIR.::GO:0006417; P:regulation of translation; IGI:TAIR.::GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0042254; P:ribosome biogenesis; IGI:TAIR.::GO:0009845; P:seed germination; IGI:TAIR.
222B8PD53    427   LIS12_POSPM Nuclear distribution protein PAC1...615.5     32.7     30     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
223B4KRQ4    679   WDR48_DROMO WD repeat-containing protein 48 h...1570.001     44.7     26     45
224B4J8H6    667   WDR48_DROGR WD repeat-containing protein 48 h...1570.001     44.7     26     45
225Q1LZ08    668   WDR48_DROME WD repeat-containing protein 48 h...1630.001     44.7     26     44
226B4MFM2    667   WDR48_DROVI WD repeat-containing protein 48 h...1570.001     44.3     26     45
227Q2HBX6    454   LIS11_CHAGB Nuclear distribution protein PAC1...1220.001     44.3     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
228D1ZEM6    486   LIS12_SORMK Nuclear distribution protein PAC1...2420.001     44.3     24     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
229B4QB64    668   WDR48_DROSI WD repeat-containing protein 48 h...1310.001     44.3     27     46
230P25382    515   NLE1_YEAST Ribosome assembly protein 4 OS=Sac...1330.002     43.5     27     50GO:0005730; C:nucleolus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
231B4HND9    680   WDR48_DROSE WD repeat-containing protein 48 h...1630.001     44.3     27     44
232Q05AM5    821   ELP2_DANRE Elongator complex protein 2 OS=Dan...2260.001     44.3     27     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; ISS:UniProtKB.
GO:0061133; F:endopeptidase activator activity; ISS:UniProtKB.
GO:0043248; P:proteasome assembly; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.
233Q28DW0    333   CIAO1_XENTR Probable cytosolic iron-sulfur pr...531.5     34.3     36     57
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
234Q16MY0    659   WDR48_AEDAE WD repeat-containing protein 48 h...1310.001     44.3     27     46
235Q96DI7    357   SNR40_HUMAN U5 small nuclear ribonucleoprotei...1550.002     43.5     23     49GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005732; C:small nucleolar ribonucleoprotein complex; NAS:UniProtKB.::GO:0005682; C:U5 snRNP; TAS:ProtInc.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
236Q5AZX0    567   PFS2_EMENI Polyadenylation factor subunit 2 O...3350.002     43.9     21     34GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
237Q9JJA4    423   WDR12_MOUSE Ribosome biogenesis protein WDR12...2680.002     43.9     26     45GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:MGI.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0007219; P:Notch signaling pathway; IPI:MGI.
238Q2HJH6    358   SNR40_BOVIN U5 small nuclear ribonucleoprotei...1550.002     43.5     23     49GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
239Q0P593    415   WDR69_BOVIN Outer row dynein assembly protein...2840.88     35     22     39GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
240Q8JZX3    405   POC1A_MOUSE POC1 centriolar protein homolog A...3340.002     43.5     20     41GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.
241Q5BK30    415   WDR69_RAT Outer row dynein assembly protein 1...3080.013     40.8     23     40GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
records
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