Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL094C
Length:
1115
Number of sequences:
5887
Description:
YGL094C PAN2 SGDID:S000003062, Chr VII from 334465-331118, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential subunit of the Pan2p-Pan3p poly(A)-ribonuclease complex, which acts to control poly(A) tail length and regulate the stoichiometry and activity of postreplication repair complexes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q6CFE7    757   REXO3_YARLI RNA exonuclease 3 OS=lipolytica)....1910.00000002     62     31     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
62P0CQ44    408   REXO4_CRYNJ RNA exonuclease 4 OS=ATCC MYA-565...1910.00000002     61.2     29     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
63P0CQ45    408   REXO4_CRYNB RNA exonuclease 4 OS=(Filobasidie...1910.00000002     61.2     29     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
64Q66UW5    181   ISG20_PIG Interferon-stimulated gene 20 kDa p...1690.0000008     54.3     30     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
65Q750A5    382   REXO3_ASHGO RNA exonuclease 3 OS=Y-1056) (Yea...1280.000002     55.1     34     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
66Q6CJB5    478   REXO3_KLULA RNA exonuclease 3 OS=1267 / NRRL ...750.000002     55.5     39     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
67Q96AZ6    181   ISG20_HUMAN Interferon-stimulated gene 20 kDa...1870.000009     50.8     28     44GO:0016605; C:PML body; IDA:UniProtKB.
GO:0000175; F:3'-5'-exoribonuclease activity; IDA:UniProtKB.::GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008310; F:single-stranded DNA specific 3'-5' exodeoxyribonuclease activity; IDA:UniProtKB.
GO:0008283; P:cell proliferation; TAS:ProtInc.::GO:0000738; P:DNA catabolic process, exonucleolytic; IDA:UniProtKB.::GO:0009615; P:response to virus; IDA:UniProtKB.::GO:0006401; P:RNA catabolic process; IDA:UniProtKB.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.::GO:0060337; P:type I interferon-mediated signaling pathway; TAS:Reactome.
68Q9P7H2    540   REXO3_SCHPO RNA exonuclease 3 OS=Schizosaccha...1490.00001     53.1     32     47GO:0005739; C:mitochondrion; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0008408; F:3'-5' exonuclease activity; ISS:PomBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:PomBase.::GO:0034476; P:U5 snRNA 3'-end processing; ISS:PomBase.
69Q5AL29    404   REXO3_CANAL RNA exonuclease 3 OS=Candida albi...1380.00001     52.4     29     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
70Q6FIU7    398   REXO3_CANGA RNA exonuclease 3 OS=NRRL Y-65) (...1290.00003     51.2     30     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
71Q12090    404   REXO3_YEAST RNA exonuclease 3 OS=Saccharomyce...790.00007     50.1     38     57GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0000175; F:3'-5'-exoribonuclease activity; IMP:SGD.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0043628; P:ncRNA 3'-end processing; IMP:SGD.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
72A3KPE8    409   SDN1_ARATH Small RNA degrading nuclease 1 OS=...2190.0004     47.8     25     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008408; F:3'-5' exonuclease activity; IDA:TAIR.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0010587; P:miRNA catabolic process; IDA:TAIR.
73Q9FFG1    466   SDN2_ARATH Small RNA degrading nuclease 2 OS=...1910.001     46.6     27     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
74Q9JL16    300   ISG20_MOUSE Interferon-stimulated gene 20 kDa...1670.002     45.4     29     42
GO:0008859; F:exoribonuclease II activity; IEA:EC.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
75P48778    690   GOR_PANTR Exonuclease GOR OS=Pan troglodytes ...1720.003     45.4     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
76Q10124    1647   PQE1_CAEEL Putative RNA exonuclease pqe-1 OS=...1500.004     45.1     29     49GO:0005634; C:nucleus; IDA:WormBase.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
77Q8RXK2    782   SDN3_ARATH Small RNA degrading nuclease 3 OS=...1830.011     43.5     26     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
78O94443    631   YFE9_SCHPO Uncharacterized exonuclease C637.0...1940.017     42.7     26     41GO:0005634; C:nucleus; IDA:PomBase.
GO:0008408; F:3'-5' exonuclease activity; ISS:PomBase.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0000467; P:exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:PomBase.::GO:0034415; P:tRNA 3'-trailer cleavage, exonucleolytic; ISS:PomBase.::GO:0034476; P:U5 snRNA 3'-end processing; ISS:PomBase.
79A0PJM3    583   GORL_HUMAN Putative exonuclease GOR-like prot...1720.019     42.7     27     44GO:0005622; C:intracellular; IEA:InterPro.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
80Q8IX06    675   GOR_HUMAN Exonuclease GOR OS=Homo sapiens (Hu...1720.03     42     27     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
81Q75AV4    449   PFS2_ASHGO Polyadenylation factor subunit 2 O...3130.26     38.9     21     36GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
82O74453    341   SKB15_SCHPO Shk1 kinase-binding protein 15 OS...730.33     38.1     33     53GO:0030685; C:nucleolar preribosome; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.::GO:0004860; F:protein kinase inhibitor activity; IMP:PomBase.
GO:0071775; P:regulation of cell cycle cytokinesis; IGI:PomBase.::GO:0070507; P:regulation of microtubule cytoskeleton organization; IGI:PomBase.::GO:0042254; P:ribosome biogenesis; IMP:PomBase.
83O94423    421   MFR1_SCHPO Meiotic fizzy-related protein 1 OS...540.41     38.1     30     54GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0051487; P:activation of anaphase-promoting complex activity involved in meiotic cell cycle; IGI:PomBase.::GO:0030437; P:ascospore formation; IMP:PomBase.::GO:0007138; P:meiotic anaphase II; IMP:PomBase.
84Q8N1G1    1221   REXO1_HUMAN RNA exonuclease 1 homolog OS=Homo...1320.46     38.5     33     45GO:0005634; C:nucleus; IDA:HPA.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
85Q7TT28    1213   REXO1_MOUSE RNA exonuclease 1 homolog OS=Mus ...1550.53     38.1     27     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
86Q6CP71    452   PFS2_KLULA Polyadenylation factor subunit 2 O...742.3     35.8     31     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
87Q44141    76   ANRX_NOSS1 Anaredoxin OS=Nostoc sp. (strain P...322.7     33.1     31     66
GO:0004519; F:endonuclease activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0016491; F:oxidoreductase activity; IEA:UniProtKB-KW.
88O74184    314   WAT1_SCHPO WD repeat-containing protein wat1 ...1844.3     34.7     24     42GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0031931; C:TORC1 complex; IDA:PomBase.::GO:0031932; C:TORC2 complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000226; P:microtubule cytoskeleton organization; IMP:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006397; P:mRNA processing; IMP:PomBase.::GO:0031929; P:TOR signaling cascade; TAS:PomBase.
89O13650    673   SFC9_SCHPO Putative transcription factor tau ...1855.3     34.7     23     44GO:0005829; C:cytosol; IDA:PomBase.::GO:0000127; C:transcription factor TFIIIC complex; ISS:PomBase.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006383; P:transcription from RNA polymerase III promoter; ISS:PomBase.
90Q5B563    309   SEC13_EMENI Protein transport protein sec13 O...1745.4     34.3     22     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
91P55824    2778   FAF_DROME Probable ubiquitin carboxyl-termina...1398.6     34.3     23     39GO:0005737; C:cytoplasm; IDA:FlyBase.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004221; F:ubiquitin thiolesterase activity; IEA:InterPro.::GO:0004843; F:ubiquitin-specific protease activity; TAS:FlyBase.
GO:0007349; P:cellularization; IMP:FlyBase.::GO:0009790; P:embryo development; IMP:FlyBase.::GO:0006897; P:endocytosis; NAS:FlyBase.::GO:0008354; P:germ cell migration; TAS:FlyBase.::GO:0008583; P:mystery cell differentiation; IMP:FlyBase.::GO:0045861; P:negative regulation of proteolysis; NAS:FlyBase.::GO:0007097; P:nuclear migration; IMP:FlyBase.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0016579; P:protein deubiquitination; IDA:FlyBase.::GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IGI:FlyBase.::GO:0007601; P:visual perception; IEA:UniProtKB-KW.
records
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