Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL078C
Length:
523
Number of sequences:
5887
Description:
YGL078C DBP3 SGDID:S000003046, Chr VII from 361859-360288, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative ATP-dependent RNA helicase of the DEAD-box family involved in ribosomal biogenesis"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91P24784    617   DBP1_YEAST ATP-dependent RNA helicase DBP1 OS...3976e-89     291     42     58GO:0005737; C:cytoplasm; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003724; F:RNA helicase activity; ISS:SGD.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
92Q10MH8    770   RH24_ORYSJ DEAD-box ATP-dependent RNA helicas...4237e-89     295     41     61
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
93Q2R1M8    623   RH52C_ORYSJ DEAD-box ATP-dependent RNA helica...4238e-89     291     39     58
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
94Q8TFK8    617   DED1_CANGA ATP-dependent RNA helicase DED1 OS...4242e-88     290     41     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
95A5DQS0    637   DED1_PICGU ATP-dependent RNA helicase DED1 OS...4762e-87     288     39     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
96Q6Z4K6    638   RH52B_ORYSJ DEAD-box ATP-dependent RNA helica...4122e-87     288     40     59
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
97P06634    604   DED1_YEAST ATP-dependent RNA helicase DED1 OS...4524e-87     286     39     56GO:0005737; C:cytoplasm; IC:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IDA:SGD.::GO:0033592; F:RNA strand annealing activity; IDA:SGD.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
98A6ZP47    604   DED1_YEAS7 ATP-dependent RNA helicase DED1 OS...4524e-87     286     39     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
99Q0DB53    602   RH52A_ORYSJ DEAD-box ATP-dependent RNA helica...4281e-86     285     39     59
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
100A3LQ01    647   DED1_PICST ATP-dependent RNA helicase DED1 OS...4291e-86     286     42     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
101A5DZE6    664   DED1_LODEL ATP-dependent RNA helicase DED1 OS...4352e-86     286     41     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
102Q6CLR3    627   DED1_KLULA ATP-dependent RNA helicase DED1 OS...4193e-86     285     41     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
103Q6BU54    630   DED1_DEBHA ATP-dependent RNA helicase DED1 OS...5045e-85     281     37     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
104Q5A4E2    672   DED1_CANAL ATP-dependent RNA helicase DED1 OS...4537e-85     282     39     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
105A7TTT5    441   DBP2_VANPO ATP-dependent RNA helicase DBP2 OS...3578e-83     270     42     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000184; P:nuclear-transcribed mRNA catabolic process, nonsense-mediated decay; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
106Q86XP3    938   DDX42_HUMAN ATP-dependent RNA helicase DDX42 ...4369e-83     282     39     58GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0008104; P:protein localization; IDA:UniProtKB.::GO:0045767; P:regulation of anti-apoptosis; IMP:UniProtKB.
107Q75B50    623   DED1_ASHGO ATP-dependent RNA helicase DED1 OS...4189e-83     275     40     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
108Q8H0U8    1166   RH42_ARATH DEAD-box ATP-dependent RNA helicas...4231e-82     284     38     60
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
109Q54IV3    986   DDX42_DICDI Probable ATP-dependent RNA helica...4401e-82     282     39     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
110Q9P6U9    688   DED1_NEUCR ATP-dependent RNA helicase ded-1 O...4151e-82     277     40     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
111Q810A7    929   DDX42_MOUSE ATP-dependent RNA helicase DDX42 ...4362e-82     281     39     58GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0008104; P:protein localization; ISS:UniProtKB.::GO:0045767; P:regulation of anti-apoptosis; ISS:UniProtKB.
112Q2HBE7    688   DED1_CHAGB ATP-dependent RNA helicase DED1 OS...4142e-82     276     39     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
113Q5R7D1    942   DDX42_PONAB ATP-dependent RNA helicase DDX42 ...4362e-82     281     39     58GO:0015030; C:Cajal body; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0008104; P:protein localization; ISS:UniProtKB.::GO:0045767; P:regulation of anti-apoptosis; ISS:UniProtKB.
114Q6FP38    604   DBP1_CANGA ATP-dependent RNA helicase DBP1 OS...4211e-81     272     39     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
115Q0UWA6    696   DED1_PHANO ATP-dependent RNA helicase DED1 OS...4151e-81     274     39     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
116A4RN46    1012   PRP5_MAGO7 Pre-mRNA-processing ATP-dependent ...4322e-81     279     39     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0043581; P:mycelium development; IEP:PAMGO_MGG.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
117P25888    454   RHLE_ECOLI ATP-dependent RNA helicase rhlE OS...3643e-81     267     41     62GO:0005840; C:ribosome; IDA:EcoCyc.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IDA:EcoCyc.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
118Q7SH33    1194   PRP5_NEUCR Pre-mRNA-processing ATP-dependent ...3653e-81     280     41     61GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
119Q9VHP0    798   DDX3_DROME ATP-dependent RNA helicase bel OS=...3954e-81     275     40     60GO:0005811; C:lipid particle; IDA:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0043025; C:neuronal cell body; IDA:FlyBase.::GO:0043186; C:P granule; IDA:UniProtKB.::GO:0016442; C:RNA-induced silencing complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004004; F:ATP-dependent RNA helicase activity; IMP:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0002168; P:instar larval development; IMP:FlyBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:FlyBase.::GO:0048477; P:oogenesis; IMP:FlyBase.::GO:0016246; P:RNA interference; IMP:UniProtKB.::GO:0007286; P:spermatid development; IMP:FlyBase.
120Q5F485    944   DDX42_CHICK ATP-dependent RNA helicase DDX42 ...4294e-81     277     40     59GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0008104; P:protein localization; ISS:UniProtKB.::GO:0045767; P:regulation of anti-apoptosis; ISS:UniProtKB.
121A7TKR8    650   DED1_VANPO ATP-dependent RNA helicase DED1 OS...3757e-81     271     42     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
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