Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL048C
Length:
405
Number of sequences:
5887
Description:
YGL048C RPT6 SGDID:S000003016, Chr VII from 411286-410069, Genome Release 64-1-1, reverse complement, Verified ORF, "One of six ATPases of the 19S regulatory particle of the 26S proteasome involved in the degradation of ubiquitinated substrates; bound by ubiquitin-protein ligases Ubr1p and Ufd4p; localized mainly to the nucleus throughout the cell cycle"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631Q8TZC5    510   RFCL_METKA Replication factor C large subunit...910.00003     49.7     33     54
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
632O64301    320   DPA44_BPR69 DNA polymerase accessory protein ...1670.00005     48.5     31     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
633Q6AS16    808   LON1_DESPS Lon protease 1 OS=Desulfotalea psy...2080.00005     48.9     32     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
634Q859W7    2392   YCF2_ANTFO Protein ycf2 OS=Anthoceros formosa...2120.00006     49.3     23     47GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
635Q85WV5    2062   YCF2_PINKO Protein ycf2 OS=Pinus koraiensis (...1670.0001     48.5     28     47GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
636Q5U2U0    633   CLPX_RAT ATP-dependent Clp protease ATP-bindi...1020.0001     48.1     32     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0051082; F:unfolded protein binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
637Q9JHS4    634   CLPX_MOUSE ATP-dependent Clp protease ATP-bin...1020.0001     48.1     32     53GO:0005743; C:mitochondrial inner membrane; IDA:MGI.
GO:0005524; F:ATP binding; IDA:MGI.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0051082; F:unfolded protein binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
638Q5R7N3    633   CLPX_PONAB ATP-dependent Clp protease ATP-bin...1020.0001     47.8     32     53GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
639Q5SCW3    2094   YCF2_HUPLU Protein ycf2 OS=Huperzia lucidula ...2030.0001     48.1     24     45GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
640O76031    633   CLPX_HUMAN ATP-dependent Clp protease ATP-bin...1020.0001     47.8     32     53GO:0009841; C:mitochondrial endopeptidase Clp complex; IDA:UniProtKB.::GO:0005743; C:mitochondrial inner membrane; ISS:UniProtKB.::GO:0042645; C:mitochondrial nucleoid; IDA:BHF-UCL.::GO:0005634; C:nucleus; IDA:HPA.
GO:0005524; F:ATP binding; ISS:UniProtKB.::GO:0016887; F:ATPase activity; ISS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016504; F:peptidase activator activity; IDA:UniProtKB.::GO:0051082; F:unfolded protein binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.::GO:0051603; P:proteolysis involved in cellular protein catabolic process; IDA:UniProtKB.
641Q7MX10    411   CLPX_PORGI ATP-dependent Clp protease ATP-bin...1040.0001     47.4     35     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
642B2RL24    411   CLPX_PORG3 ATP-dependent Clp protease ATP-bin...1040.0001     47.4     35     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
643Q4FQB8    424   CLPX_PSYA2 ATP-dependent Clp protease ATP-bin...1040.0002     47.4     33     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
644Q1Q8J1    424   CLPX_PSYCK ATP-dependent Clp protease ATP-bin...1040.0002     47     33     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
645B3QWK0    431   CLPX_CHLT3 ATP-dependent Clp protease ATP-bin...1100.0002     47     31     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
646Q975D4    440   RFCL_SULTO Replication factor C large subunit...1490.0002     47     28     44
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
647A8Z5Z0    855   LON_SULMW Lon protease OS=Sulcia muelleri (st...2060.0002     47.4     29     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006950; P:response to stress; IEA:UniProtKB-KW.
648Q0AJI3    427   CLPX_NITEC ATP-dependent Clp protease ATP-bin...1040.0002     47     32     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
649Q9M9L8    924   LONM3_ARATH Lon protease homolog 3, mitochond...870.0003     46.6     37     49GO:0005759; C:mitochondrial matrix; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004176; F:ATP-dependent peptidase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004252; F:serine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
650C3NHF4    405   RFCL_SULIN Replication factor C large subunit...1510.0004     45.8     30     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
651A6H5M5    2434   YCF2_CYCTA Protein ycf2 OS=Cycas taitungensis...2320.0004     46.6     21     45GO:0009570; C:chloroplast stroma; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
652A5WC69    425   CLPX_PSYWF ATP-dependent Clp protease ATP-bin...1040.0005     45.8     32     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
653Q4JAB1    437   RFCL_SULAC Replication factor C large subunit...1610.0005     45.8     27     45
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
654C4KHA7    405   RFCL_SULIK Replication factor C large subunit...1510.0005     45.4     29     47
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
655Q317Y5    455   CLPX_PROM9 ATP-dependent Clp protease ATP-bin...1080.0005     45.4     31     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
656Q7UZK6    455   CLPX_PROMP ATP-dependent Clp protease ATP-bin...1080.0005     45.4     31     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
657Q4A9R6    318   RUVB_MYCHJ Holliday junction ATP-dependent DN...700.0005     45.1     40     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
658Q4A7W4    318   RUVB_MYCH7 Holliday junction ATP-dependent DN...700.0005     45.1     40     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
659Q600N3    318   RUVB_MYCH2 Holliday junction ATP-dependent DN...700.0005     45.1     40     51
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
660Q9PLM1    419   CLPX_CHLMU ATP-dependent Clp protease ATP-bin...1010.0005     45.4     32     50
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
661A8G7G2    455   CLPX_PROM2 ATP-dependent Clp protease ATP-bin...1080.0006     45.4     31     49
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0046983; F:protein dimerization activity; IEA:InterPro.::GO:0051082; F:unfolded protein binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006457; P:protein folding; IEA:InterPro.
records
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