Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL043W
Length:
309
Number of sequences:
5887
Description:
YGL043W DST1 SGDID:S000003011, Chr VII from 417483-418412, Genome Release 64-1-1, Verified ORF, "General transcription elongation factor TFIIS, enables RNA polymerase II to read through blocks to elongation by stimulating cleavage of nascent transcripts stalled at transcription arrest sites"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61B0UYI1    210   TEAN2_DANRE Transcription elongation factor A...583.4     32.3     34     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
62P28035    705   APCE_SYNP6 Phycobiliprotein ApcE OS=(Anacysti...1165.2     32.7     27     45GO:0030089; C:phycobilisome; IEA:UniProtKB-KW.
GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.::GO:0015979; P:photosynthesis; IEA:UniProtKB-KW.::GO:0018298; P:protein-chromophore linkage; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
63Q32P73    125   RPB9_BOVIN DNA-directed RNA polymerase II sub...535.2     31.2     30     53GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
64P60899    125   RPB9_PIG DNA-directed RNA polymerase II subun...535.9     30.8     30     53GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
65P60898    125   RPB9_MOUSE DNA-directed RNA polymerase II sub...535.9     30.8     30     53GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
66P36954    125   RPB9_HUMAN DNA-directed RNA polymerase II sub...535.9     30.8     30     53GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; TAS:ProtInc.::GO:0008270; F:zinc ion binding; TAS:ProtInc.
GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
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