Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL043W
Length:
309
Number of sequences:
5887
Description:
YGL043W DST1 SGDID:S000003011, Chr VII from 417483-418412, Genome Release 64-1-1, Verified ORF, "General transcription elongation factor TFIIS, enables RNA polymerase II to read through blocks to elongation by stimulating cleavage of nascent transcripts stalled at transcription arrest sites"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31O13896    109   RPC10_SCHPO DNA-directed RNA polymerase III s...350.0007     42     46     66GO:0005829; C:cytosol; IDA:PomBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; TAS:PomBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; TAS:PomBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006384; P:transcription initiation from RNA polymerase III promoter; TAS:PomBase.::GO:0042779; P:tRNA 3'-trailer cleavage; IMP:PomBase.
32Q58548    108   RPOM_METJA DNA-directed RNA polymerase subuni...470.001     41.6     40     55
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
33Q6ZMY3    1216   SPOC1_HUMAN SPOC domain-containing protein 1 ...1480.001     44.3     26     46
GO:0010923; P:negative regulation of phosphatase activity; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
34O95402    600   MED26_HUMAN Mediator of RNA polymerase II tra...740.001     43.9     34     61GO:0016592; C:mediator complex; IDA:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0001104; F:RNA polymerase II transcription cofactor activity; IDA:UniProtKB.::GO:0003713; F:transcription coactivator activity; TAS:ProtInc.
GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.
35Q07271    111   RPOM_SULAC DNA-directed RNA polymerase subuni...430.001     41.2     42     56
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
36Q7TN02    588   MED26_MOUSE Mediator of RNA polymerase II tra...740.005     42.4     31     61GO:0016592; C:mediator complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:MGI.::GO:0001104; F:RNA polymerase II transcription cofactor activity; ISS:UniProtKB.
37Q90YY5    597   MED26_XENLA Mediator of RNA polymerase II tra...740.006     41.6     32     62GO:0016592; C:mediator complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0001104; F:RNA polymerase II transcription cofactor activity; ISS:UniProtKB.
38Q9GMV6    350   TEANC_MACFA Transcription elongation factor A...1760.008     41.2     23     41GO:0005634; C:nucleus; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
39Q5XIC7    207   TEAN2_RAT Transcription elongation factor A N...780.011     40     32     59GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
40A5PK23    599   MED26_BOVIN Mediator of RNA polymerase II tra...740.011     40.8     32     59GO:0016592; C:mediator complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0001104; F:RNA polymerase II transcription cofactor activity; ISS:UniProtKB.
41Q8N8B7    351   TEANC_HUMAN Transcription elongation factor A...3430.014     40.4     22     39GO:0005634; C:nucleus; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0032784; P:regulation of transcription elongation, DNA-dependent; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
42Q8R2M0    207   TEAN2_MOUSE Transcription elongation factor A...660.03     38.9     32     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
43A1B049    218   KAD_PARDP Adenylate kinase OS=Paracoccus deni...970.1     37.4     29     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004017; F:adenylate kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0009165; P:nucleotide biosynthetic process; IEA:UniProtKB-KW.
44P10772    218   KAD_PARDE Adenylate kinase OS=Paracoccus deni...970.1     37.4     29     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004017; F:adenylate kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0009165; P:nucleotide biosynthetic process; IEA:UniProtKB-KW.
45Q6MFY5    123   RPA12_RAT DNA-directed RNA polymerase I subun...900.12     35.8     30     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
46Q1RMP0    123   RPA12_BOVIN DNA-directed RNA polymerase I sub...460.2     35     39     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
47Q791N7    123   RPA12_MOUSE DNA-directed RNA polymerase I sub...600.22     35     38     50GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
48Q96MN5    208   TEAN2_HUMAN Transcription elongation factor A...570.3     35.8     30     65GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
49Q91FH5    140   VF349_IIV6 Putative transcription elongation ...340.32     35     38     59
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
50A5PKE4    208   TEAN2_BOVIN Transcription elongation factor A...570.45     35     30     67GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
51P36958    129   RPB9_DROME DNA-directed RNA polymerase II sub...430.56     33.9     35     58GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:FlyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:FlyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007067; P:mitosis; IMP:FlyBase.::GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:FlyBase.
52O29033    103   RPOM_ARCFU DNA-directed RNA polymerase subuni...610.56     33.5     26     46
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
53Q1XHV8    126   RPA12_PANTR DNA-directed RNA polymerase I sub...460.6     33.9     39     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
54Q9P1U0    126   RPA12_HUMAN DNA-directed RNA polymerase I sub...460.6     33.9     39     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
55O94703    119   RPA12_SCHPO DNA-directed RNA polymerase I sub...690.64     33.5     36     48GO:0005829; C:cytosol; IDA:PomBase.::GO:0005736; C:DNA-directed RNA polymerase I complex; IGI:PomBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006360; P:transcription from RNA polymerase I promoter; IGI:PomBase.::GO:0006353; P:transcription termination, DNA-dependent; IGI:PomBase.
56Q5TM50    126   RPA12_MACMU DNA-directed RNA polymerase I sub...460.77     33.5     39     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
57Q92576    2039   PHF3_HUMAN PHD finger protein 3 OS=Homo sapie...920.97     35     32     48GO:0005634; C:nucleus; IEA:InterPro.
GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0007275; P:multicellular organismal development; NAS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
58Q90YL3    589   MED26_DANRE Mediator of RNA polymerase II tra...781.1     34.7     28     56GO:0016592; C:mediator complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0001104; F:RNA polymerase II transcription cofactor activity; ISS:UniProtKB.
59O27369    104   RPOM_METTH DNA-directed RNA polymerase subuni...621.7     32     31     44
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
60Q8JGS1    1263   STIL_DANRE SCL-interrupting locus protein hom...1071.8     34.3     26     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0010171; P:body morphogenesis; IMP:ZFIN.::GO:0007052; P:mitotic spindle organization; IMP:ZFIN.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0051225; P:spindle assembly; IMP:ZFIN.
61B0UYI1    210   TEAN2_DANRE Transcription elongation factor A...583.4     32.3     34     62GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.
GO:0006351; P:transcription, DNA-dependent; IEA:InterPro.
records
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