Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL014W
Length:
888
Number of sequences:
5887
Description:
YGL014W PUF4 SGDID:S000002982, Chr VII from 466141-468807, Genome Release 64-1-1, Verified ORF, "Member of the PUF protein family, which is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding nucleolar ribosomal RNA-processing factors"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P25339    888   PUF4_YEAST Pumilio homology domain family mem...8880     1826     100     100GO:0005737; C:cytoplasm; IDA:SGD.
GO:0003729; F:mRNA binding; IDA:SGD.
GO:0001308; P:negative regulation of chromatin silencing involved in replicative cell aging; IGI:SGD.::GO:0017148; P:negative regulation of translation; IDA:SGD.::GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; IGI:SGD.::GO:0008104; P:protein localization; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
2Q92359    681   YDHE_SCHPO Pumilio domain-containing protein ...1140.005     44.3     25     46GO:0005829; C:cytosol; IDA:PomBase.
GO:0003729; F:mRNA binding; ISS:PomBase.
GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; ISS:PomBase.
3Q9LM20    515   PUM8_ARATH Putative pumilio homolog 8, chloro...3242e-65     233     40     59GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
4Q9C9R6    650   PUM7_ARATH Putative pumilio homolog 7, chloro...3231e-64     234     42     59GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003729; F:mRNA binding; IPI:TAIR.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
5Q9LVC3    596   PUM12_ARATH Pumilio homolog 12 OS=Arabidopsis...3243e-63     229     41     58GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
6Q9LDW3    556   PUM11_ARATH Pumilio homolog 11 OS=Arabidopsis...3481e-59     218     40     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
7Q09829    780   YAD3_SCHPO Pumilio domain-containing protein ...3236e-56     210     35     57GO:0005794; C:Golgi apparatus; IDA:PomBase.
GO:0003729; F:mRNA binding; ISS:PomBase.
GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; ISS:PomBase.
8Q1PFN9    564   PUM9_ARATH Pumilio homolog 9 OS=Arabidopsis t...3201e-54     202     38     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
9Q8TB72    1066   PUM2_HUMAN Pumilio homolog 2 OS=Homo sapiens ...3475e-53     204     33     56GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
10Q80U58    1066   PUM2_MOUSE Pumilio homolog 2 OS=Mus musculus ...3475e-53     204     33     56GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IDA:MGI.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0034063; P:stress granule assembly; IDA:MGI.
11Q5R5X3    1186   PUM1_PONAB Pumilio homolog 1 OS=Pongo abelii ...2562e-22     107     25     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
12Q14671    1186   PUM1_HUMAN Pumilio homolog 1 OS=Homo sapiens ...2562e-22     107     25     49GO:0005829; C:cytosol; TAS:Reactome.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016044; P:cellular membrane organization; TAS:Reactome.::GO:0006892; P:post-Golgi vesicle-mediated transport; TAS:Reactome.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
13P39016    859   MPT5_YEAST Suppressor protein MPT5 OS=Sacchar...3133e-51     197     35     56GO:0005737; C:cytoplasm; IDA:SGD.
GO:0003729; F:mRNA binding; IDA:SGD.::GO:0030674; F:protein binding, bridging; IPI:SGD.
GO:0045947; P:negative regulation of translational initiation; IPI:SGD.::GO:1900153; P:positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; IDA:SGD.
14Q80U78    1189   PUM1_MOUSE Pumilio homolog 1 OS=Mus musculus ...2582e-21     103     25     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
15Q2VB19    1189   PUM1_CHICK Pumilio homolog 1 OS=Gallus gallus...2602e-21     104     24     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
16P25822    1533   PUM_DROME Maternal protein pumilio OS=Drosoph...2517e-22     105     25     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003730; F:mRNA 3'-UTR binding; TAS:FlyBase.::GO:0000900; F:translation repressor activity, nucleic acid binding; TAS:FlyBase.
GO:0008595; P:anterior/posterior axis specification, embryo; TAS:FlyBase.::GO:0001709; P:cell fate determination; TAS:FlyBase.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0042078; P:germ-line stem cell division; NAS:FlyBase.::GO:0008258; P:head involution; IMP:FlyBase.::GO:0007616; P:long-term memory; IMP:FlyBase.::GO:0007067; P:mitosis; TAS:FlyBase.::GO:0045786; P:negative regulation of cell cycle; TAS:FlyBase.::GO:0045892; P:negative regulation of transcription, DNA-dependent; TAS:FlyBase.::GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; TAS:FlyBase.::GO:0048477; P:oogenesis; TAS:FlyBase.::GO:0007280; P:pole cell migration; TAS:FlyBase.::GO:0045727; P:positive regulation of translation; TAS:FlyBase.::GO:0008582; P:regulation of synaptic growth at neuromuscular junction; IDA:FlyBase.::GO:0050804; P:regulation of synaptic transmission; IMP:FlyBase.
17Q9LJX4    961   PUM5_ARATH Pumilio homolog 5 OS=Arabidopsis t...2260.0000001     59.7     22     40GO:0005829; C:cytosol; IDA:TAIR.::GO:0005773; C:vacuole; IDA:TAIR.
GO:0003729; F:mRNA binding; IDA:UniProtKB.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
18Q9SS47    1003   PUM4_ARATH Pumilio homolog 4 OS=Arabidopsis t...1130.44     38.1     23     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003729; F:mRNA binding; IDA:UniProtKB.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
19Q9LP21    528   PUM10_ARATH Putative pumilio homolog 10 OS=Ar...3261e-46     179     37     56GO:0005737; C:cytoplasm; IDA:TAIR.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
20Q07807    879   PUF3_YEAST mRNA-binding protein PUF3 OS=Sacch...2300.0000000000009     76.3     26     48GO:0032473; C:external side of mitochondrial outer membrane; IDA:SGD.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0003729; F:mRNA binding; IDA:SGD.
GO:0009060; P:aerobic respiration; IMP:SGD.::GO:0008298; P:intracellular mRNA localization; IMP:SGD.::GO:0051646; P:mitochondrion localization; IMP:SGD.::GO:0007005; P:mitochondrion organization; IMP:SGD.::GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; IMP:SGD.
21Q9ZW02    964   PUM3_ARATH Pumilio homolog 3 OS=Arabidopsis t...2605e-21     102     23     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0003729; F:mRNA binding; IDA:UniProtKB.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
22Q9ZW07    968   PUM1_ARATH Pumilio homolog 1 OS=Arabidopsis t...1220.035     41.6     24     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003729; F:mRNA binding; IDA:UniProtKB.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
23Q9ZW06    972   PUM2_ARATH Pumilio homolog 2 OS=Arabidopsis t...1211.4     36.6     21     43GO:0005829; C:cytosol; IDA:TAIR.
GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
24Q9C5E7    861   PUM6_ARATH Pumilio homolog 6, chloroplastic O...2540.0000000006     67     22     43GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003729; F:mRNA binding; IDA:UniProtKB.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
25O94462    732   PUF3_SCHPO mRNA-binding protein puf3 OS=Schiz...2811e-22     107     23     50GO:0005829; C:cytosol; IDA:PomBase.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0003729; F:mRNA binding; ISS:PomBase.
GO:0033554; P:cellular response to stress; IEP:PomBase.::GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; ISS:PomBase.
26Q9FMH4    527   PUM13_ARATH Putative pumilio homolog 13 OS=Ar...2922e-34     142     32     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
27Q4PSD1    518   PUM14_ARATH Pumilio homolog 14 OS=Arabidopsis...2674e-30     129     33     52GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
28O81465    477   PUM15_ARATH Pumilio homolog 15 OS=Arabidopsis...2600.011     42.7     22     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
29O60059    661   YG58_SCHPO Pumilio domain-containing protein ...3107e-18     92     24     45GO:0005737; C:cytoplasm; IDA:PomBase.
GO:0003729; F:mRNA binding; ISS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; ISS:PomBase.
30Q9P789    1060   YN8E_SCHPO Pumilio domain-containing protein ...1810.0001     49.7     23     46GO:0005829; C:cytosol; IDA:PomBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
31Q09312    632   FBF2_CAEEL Fem-3 mRNA-binding factor 2 OS=Cae...3283e-16     87     25     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003730; F:mRNA 3'-UTR binding; IDA:WormBase.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040022; P:feminization of hermaphroditic germ-line; IMP:WormBase.::GO:0051729; P:germline cell cycle switching, mitotic to meiotic cell cycle; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0045132; P:meiotic chromosome segregation; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0017148; P:negative regulation of translation; IGI:WormBase.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0007283; P:spermatogenesis; IMP:WormBase.
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