Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL014W
Length:
888
Number of sequences:
5887
Description:
YGL014W PUF4 SGDID:S000002982, Chr VII from 466141-468807, Genome Release 64-1-1, Verified ORF, "Member of the PUF protein family, which is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding nucleolar ribosomal RNA-processing factors"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q09312    632   FBF2_CAEEL Fem-3 mRNA-binding factor 2 OS=Cae...3283e-16     87     25     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003730; F:mRNA 3'-UTR binding; IDA:WormBase.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040022; P:feminization of hermaphroditic germ-line; IMP:WormBase.::GO:0051729; P:germline cell cycle switching, mitotic to meiotic cell cycle; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0045132; P:meiotic chromosome segregation; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0017148; P:negative regulation of translation; IGI:WormBase.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0007283; P:spermatogenesis; IMP:WormBase.
32O74438    703   MCP2_SCHPO Meiotic coiled-coil protein 2 OS=S...1301.9     35.8     21     49GO:0005737; C:cytoplasm; IDA:PomBase.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007126; P:meiosis; IEP:PomBase.
33P47135    1091   JSN1_YEAST Protein JSN1 OS=Saccharomyces cere...1450.016     42.7     23     43GO:0032473; C:external side of mitochondrial outer membrane; IDA:SGD.
GO:0003729; F:mRNA binding; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0034629; P:cellular protein complex localization; IMP:SGD.::GO:0051654; P:establishment of mitochondrion localization; IMP:SGD.::GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; IGI:SGD.
34Q9N5M6    614   FBF1_CAEEL Fem-3 mRNA-binding factor 1 OS=Cae...3380.00000000000003     80.5     25     46GO:0043073; C:germ cell nucleus; IDA:WormBase.::GO:0048471; C:perinuclear region of cytoplasm; IDA:WormBase.
GO:0003730; F:mRNA 3'-UTR binding; IDA:WormBase.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040022; P:feminization of hermaphroditic germ-line; IMP:WormBase.::GO:0051729; P:germline cell cycle switching, mitotic to meiotic cell cycle; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0017148; P:negative regulation of translation; IGI:WormBase.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IMP:WormBase.
35Q10238    581   MPF1_SCHPO Meiotic PUF family protein 1 OS=Sc...2930.00000000000004     79.7     23     46GO:0005737; C:cytoplasm; IDA:PomBase.
GO:0003729; F:mRNA binding; ISS:PomBase.
GO:0007126; P:meiosis; IEP:PomBase.
36Q12221    1075   PUF2_YEAST mRNA-binding protein PUF2 OS=Sacch...1260.005     44.3     25     47GO:0005737; C:cytoplasm; IDA:SGD.
GO:0003729; F:mRNA binding; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; IGI:SGD.
37Q9LVG3    327   PUM18_ARATH Pumilio homolog 18 OS=Arabidopsis...2850.0000000004     65.9     25     46GO:0005737; C:cytoplasm; IDA:TAIR.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
38Q9LSS8    327   PUM19_ARATH Putative pumilio homolog 19 OS=Ar...2820.000000001     64.3     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
39Q9FIE9    332   PUM16_ARATH Putative pumilio homolog 16 OS=Ar...1277.1     33.5     24     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
40Q9LXC5    517   PUM21_ARATH Putative pumilio homolog 21 OS=Ar...4730.0001     49.7     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
41Q9C8B8    332   PUM17_ARATH Putative pumilio homolog 17 OS=Ar...1661.3     36.2     18     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
42Q9XI17    332   PUM20_ARATH Putative pumilio homolog 20 OS=Ar...1360.001     46.2     25     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
43Q9LNI2    361   PUM22_ARATH Putative pumilio homolog 22 OS=Ar...3260.041     40.8     25     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
44Q9LK18    137   PUM25_ARATH Putative pumilio homolog 25 OS=Ar...419.3     32     37     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
45Q92347    655   NOP9_SCHPO Nucleolar protein 9 OS=Schizosacch...740.34     38.1     27     51GO:0005730; C:nucleolus; IDA:PomBase.
GO:0003723; F:RNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
46Q9C552    753   PUM23_ARATH Pumilio homolog 23 OS=Arabidopsis...1510.68     37.4     25     44GO:0005730; C:nucleolus; IDA:TAIR.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0010252; P:auxin homeostasis; IMP:TAIR.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0009749; P:response to glucose stimulus; IEP:TAIR.::GO:0009744; P:response to sucrose stimulus; IEP:TAIR.
47O61345    737   PEN_DROME Protein penguin OS=Drosophila melan...1761     36.6     20     41
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007475; P:apposition of dorsal and ventral imaginal disc-derived wing surfaces; IMP:FlyBase.
48Q9A6M5    640   DXS_CAUCR 1-deoxy-D-xylulose-5-phosphate synt...875.3     34.3     26     44
GO:0008661; F:1-deoxy-D-xylulose-5-phosphate synthase activity; IEA:EC.
GO:0016114; P:terpenoid biosynthetic process; IEA:InterPro.::GO:0009228; P:thiamine biosynthetic process; IEA:UniProtKB-KW.
49B8GXC4    640   DXS_CAUCN 1-deoxy-D-xylulose-5-phosphate synt...875.3     34.3     26     44
GO:0008661; F:1-deoxy-D-xylulose-5-phosphate synthase activity; IEA:EC.
GO:0016114; P:terpenoid biosynthetic process; IEA:InterPro.::GO:0009228; P:thiamine biosynthetic process; IEA:UniProtKB-KW.
50O48556    214   IPYR_MAIZE Soluble inorganic pyrophosphatase ...635.4     33.5     30     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004427; F:inorganic diphosphatase activity; IEA:EC.::GO:0000287; F:magnesium ion binding; IEA:InterPro.
GO:0006796; P:phosphate-containing compound metabolic process; IEA:InterPro.
51B0T3X7    638   DXS_CAUSK 1-deoxy-D-xylulose-5-phosphate synt...995.5     34.3     25     41
GO:0008661; F:1-deoxy-D-xylulose-5-phosphate synthase activity; IEA:EC.
GO:0016114; P:terpenoid biosynthetic process; IEA:InterPro.::GO:0009228; P:thiamine biosynthetic process; IEA:UniProtKB-KW.
52O95104    1147   SFR15_HUMAN Splicing factor, arginine/serine-...717.7     33.9     27     45GO:0005634; C:nucleus; IDA:HPA.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
records
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