Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL004C
Length:
417
Number of sequences:
5887
Description:
YGL004C RPN14 SGDID:S000002972, Chr VII from 491956-490703, Genome Release 64-1-1, reverse complement, Verified ORF, "Proteasome-interacting protein involved in the assembly of the base subcomplex of the 19S proteasome regulatory particle (RP); null mutants accumulate ubiquitinated Gcn4p and display decreased 26S proteasome stability; interacts with Rpt5p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
871Q7PS24    341   CIAO1_ANOGA Probable cytosolic iron-sulfur pr...1017.6     32.3     26     42
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
872Q54WA3    316   PEX7_DICDI Peroxisomal targeting signal 2 rec...1029.1     32     25     47GO:0005777; C:peroxisome; ISS:dictyBase.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; ISS:dictyBase.
GO:0016558; P:protein import into peroxisome matrix; IEA:InterPro.
873B3RQN1    432   WDR12_TRIAD Ribosome biogenesis protein WDR12...660.26     37     32     53GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
874A1CQL6    453   CIAO1_ASPCL Probable cytosolic iron-sulfur pr...760.26     37     34     49
875C6L7U1    1485   LIN1_LOTJA Putative E3 ubiquitin-protein liga...2330.27     37.4     25     40GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0009877; P:nodulation; IEA:UniProtKB-KW.
876A7RHG8    416   WDR12_NEMVE Ribosome biogenesis protein WDR12...1120.27     37     25     35GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
877Q95JL5    571   WDR16_MACFA WD repeat-containing protein 16 O...1130.35     37     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
878Q9FNZ1    443   C3H63_ARATH Zinc finger CCCH domain-containin...710.28     37     32     52
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
879Q5ZMC3    476   WSDU1_CHICK WD repeat, SAM and U-box domain-c...1270.28     37     28     45GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
880Q2UPI0    438   CIAO1_ASPOR Probable cytosolic iron-sulfur pr...760.28     37     34     47
881B8MWR8    438   CIAO1_ASPFN Probable cytosolic iron-sulfur pr...760.28     37     34     47
882A6ZMA9    807   ERB1_YEAS7 Ribosome biogenesis protein ERB1 O...570.28     37.4     33     54GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
883A2RUS2    1198   DEND3_HUMAN DENN domain-containing protein 3 ...830.29     37.4     31     51
884Q5DFU0    352   CIAO1_SCHJA Probable cytosolic iron-sulfur pr...860.65     35.8     27     48
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
885Q6DTM3    1047   AHI1_RAT Jouberin OS=Rattus norvegicus (Rat)....1700.3     37.4     23     41GO:0005912; C:adherens junction; ISS:UniProtKB.::GO:0005911; C:cell-cell junction; ISS:UniProtKB.::GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.::GO:0036038; C:TCTN-B9D complex; ISS:UniProtKB.
GO:0042384; P:cilium assembly; ISS:UniProtKB.::GO:0035844; P:cloaca development; ISS:UniProtKB.::GO:0001947; P:heart looping; ISS:UniProtKB.::GO:0030902; P:hindbrain development; ISS:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; ISS:UniProtKB.::GO:0070986; P:left/right axis specification; ISS:UniProtKB.::GO:0001738; P:morphogenesis of a polarized epithelium; ISS:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.::GO:0071599; P:otic vesicle development; ISS:UniProtKB.::GO:0035845; P:photoreceptor cell outer segment organization; ISS:UniProtKB.::GO:0030862; P:positive regulation of polarized epithelial cell differentiation; ISS:UniProtKB.::GO:0002092; P:positive regulation of receptor internalization; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0039023; P:pronephric duct morphogenesis; ISS:UniProtKB.::GO:0039008; P:pronephric nephron tubule morphogenesis; ISS:UniProtKB.::GO:0050795; P:regulation of behavior; ISS:UniProtKB.::GO:0010842; P:retina layer formation; ISS:UniProtKB.::GO:0065001; P:specification of axis polarity; ISS:UniProtKB.::GO:0007169; P:transmembrane receptor protein tyrosine kinase signaling pathway; ISS:UniProtKB.::GO:0016192; P:vesicle-mediated transport; ISS:UniProtKB.
886A1CQI9    788   ERB1_ASPCL Ribosome biogenesis protein erb1 O...610.31     37     33     49GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
887Q9FNZ2    430   C3H48_ARATH Zinc finger CCCH domain-containin...710.51     36.2     31     52
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
888Q8R2N2    686   CIR1A_MOUSE Cirhin OS=Mus musculus (Mouse). G...1250.32     37     25     44GO:0005730; C:nucleolus; ISS:UniProtKB.
889Q9NZJ0    730   DTL_HUMAN Denticleless protein homolog OS=Hom...727.8     32.7     29     42GO:0005813; C:centrosome; IDA:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; IMP:UniProtKB.::GO:0006513; P:protein monoubiquitination; IDA:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0009411; P:response to UV; IDA:UniProtKB.::GO:0019985; P:translesion synthesis; IDA:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IDA:UniProtKB.
890A8XXC7    417   WDFY2_CAEBR WD repeat and FYVE domain-contain...900.33     36.6     26     47
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.
891Q40507    375   GBB3_TOBAC Guanine nucleotide-binding protein...1180.48     36.2     27     41
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
892B5X9P2    330   CIO1A_SALSA Probable cytosolic iron-sulfur pr...732.2     33.9     29     47
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
893Q06440    651   CORO_YEAST Coronin-like protein OS=Saccharomy...1400.34     37     26     45GO:0030479; C:actin cortical patch; IDA:SGD.::GO:0005826; C:actomyosin contractile ring; IBA:RefGenome.
GO:0051015; F:actin filament binding; IDA:SGD.::GO:0008017; F:microtubule binding; IDA:SGD.::GO:0030674; F:protein binding, bridging; IDA:SGD.
GO:0051666; P:actin cortical patch localization; IMP:SGD.::GO:0007015; P:actin filament organization; IMP:SGD.::GO:0007017; P:microtubule-based process; IPI:SGD.::GO:0034316; P:negative regulation of Arp2/3 complex-mediated actin nucleation; IDA:SGD.::GO:2000601; P:positive regulation of Arp2/3 complex-mediated actin nucleation; IDA:SGD.
894P18851    423   GBB_YEAST Guanine nucleotide-binding protein ...700.34     36.6     30     43GO:0005834; C:heterotrimeric G-protein complex; IDA:SGD.::GO:0005937; C:mating projection; IDA:SGD.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IMP:SGD.
GO:0031684; P:heterotrimeric G-protein complex cycle; IMP:SGD.::GO:0001403; P:invasive growth in response to glucose limitation; IMP:SGD.::GO:0000750; P:pheromone-dependent signal transduction involved in conjugation with cellular fusion; IGI:SGD.::GO:0010525; P:regulation of transposition, RNA-mediated; IMP:SGD.
895Q7ZY78    396   WDR4_XENLA tRNA (guanine-N(7)-)-methyltransfe...1130.35     36.6     23     50GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006400; P:tRNA modification; ISS:UniProtKB.
896Q6QEF8    472   CORO6_HUMAN Coronin-6 OS=Homo sapiens (Human)...1060.36     36.6     27     45GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.
897Q08924    1013   WDR6_YEAST Regulator of Ty1 transposition pro...721.6     35     24     43GO:0005768; C:endosome; IDA:SGD.
GO:0032456; P:endocytic recycling; IMP:SGD.
898Q54J37    827   STRN_DICDI Striatin homolog OS=Dictyostelium ...411.1     35.4     37     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
899Q9Y6I7    421   WSB1_HUMAN WD repeat and SOCS box-containing ...1060.39     36.6     29     43GO:0005622; C:intracellular; IDA:LIFEdb.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
900P87314    932   HIR1_SCHPO Protein hir1 OS=Schizosaccharomyce...3010     32.3     43     60GO:0005829; C:cytosol; IDA:PomBase.::GO:0000417; C:HIR complex; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; TAS:PomBase.
GO:0006995; P:cellular response to nitrogen starvation; IMP:PomBase.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0030702; P:chromatin silencing at centromere; IMP:PomBase.::GO:0030466; P:chromatin silencing at silent mating-type cassette; IMP:PomBase.::GO:0006336; P:DNA replication-independent nucleosome assembly; TAS:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0007070; P:negative regulation of transcription from RNA polymerase II promoter during mitosis; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IMP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
901O08653    2629   TEP1_RAT Telomerase protein component 1 OS=Ra...560.41     37     29     59GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 1000 871 - 900
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::