Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL004C
Length:
417
Number of sequences:
5887
Description:
YGL004C RPN14 SGDID:S000002972, Chr VII from 491956-490703, Genome Release 64-1-1, reverse complement, Verified ORF, "Proteasome-interacting protein involved in the assembly of the base subcomplex of the 19S proteasome regulatory particle (RP); null mutants accumulate ubiquitinated Gcn4p and display decreased 26S proteasome stability; interacts with Rpt5p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
601B0DWM8    452   YTM1_LACBS Ribosome biogenesis protein YTM1 O...1532.2     34.3     22     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
602A0JPH4    1311   SCAP_XENLA Sterol regulatory element-binding ...860.13     38.5     28     47GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
603O16023    428   ESC_MUSDO Polycomb protein esc OS=Musca domes...1200.004     42.7     28     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
604Q7S8R5    645   MDV1_NEUCR Mitochondrial division protein 1 O...429.4     32.3     40     57GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
605B3RNR8    313   CIAO1_TRIAD Probable cytosolic iron-sulfur pr...830.39     36.2     29     42
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
606Q3MHE2    521   PRP4_BOVIN U4/U6 small nuclear ribonucleoprot...1229.6     32.3     24     39GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
607Q4X0A9    696   SCONB_ASPFU Probable E3 ubiquitin ligase comp...553.5     33.5     31     51
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
608B0XTS1    696   SCONB_ASPFC Probable E3 ubiquitin ligase comp...553.5     33.5     31     51
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
609B3NQR5    335   CIAO1_DROER Probable cytosolic iron-sulfur pr...1806.3     32.7     24     36
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
610Q9SJT9    1218   COPA2_ARATH Coatomer subunit alpha-2 OS=Arabi...1080.069     39.3     26     44GO:0030126; C:COPI vesicle coat; IEA:InterPro.::GO:0005829; C:cytosol; IDA:TAIR.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
611Q5NVD0    521   PRP4_PONAB U4/U6 small nuclear ribonucleoprot...1228.1     32.3     24     39GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
612O43172    522   PRP4_HUMAN U4/U6 small nuclear ribonucleoprot...1228.3     32.3     24     39GO:0015030; C:Cajal body; IDA:BHF-UCL.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; NAS:UniProtKB.::GO:0071001; C:U4/U6 snRNP; IDA:BHF-UCL.
GO:0005515; F:protein binding; IPI:BHF-UCL.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:BHF-UCL.
613O35353    340   GBB4_RAT Guanine nucleotide-binding protein s...2140.017     40.8     22     42
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
614B4P7Q3    335   CIAO1_DROYA Probable cytosolic iron-sulfur pr...1805     32.7     24     36
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
615Q5BLX8    315   WDR83_RAT WD repeat domain-containing protein...2220.005     42.4     23     41GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
616Q5M7T1    339   CIAO1_RAT Probable cytosolic iron-sulfur prot...2210.58     35.8     23     39GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
617Q9W7F2    607   WDR1A_XENLA WD repeat-containing protein 1-A ...2290.005     42.7     20     42GO:0005884; C:actin filament; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0003779; F:actin binding; ISS:UniProtKB.
GO:0030043; P:actin filament fragmentation; IDA:UniProtKB.
618A6ZZZ8    645   CAF4_YEAS7 CCR4-associated factor 4 OS=Saccha...1639.7     32.3     22     37GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
619P29387    340   GBB4_MOUSE Guanine nucleotide-binding protein...2140.018     40.8     22     42
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:MGI.
620Q99KN2    339   CIAO1_MOUSE Probable cytosolic iron-sulfur pr...1420.62     35.8     27     39GO:0071817; C:MMXD complex; ISS:UniProtKB.
GO:0003700; F:sequence-specific DNA binding transcription factor activity; TAS:MGI.
GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:MGI.
621Q8VEJ4    485   NLE1_MOUSE Notchless protein homolog 1 OS=Mus...1370.017     40.8     23     39GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0001826; P:inner cell mass cell differentiation; IMP:MGI.::GO:0007219; P:Notch signaling pathway; IDA:MGI.
622B0XAF3    338   CIAO1_CULQU Probable cytosolic iron-sulfur pr...781.2     34.7     27     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
623B4QFZ8    335   CIAO1_DROSI Probable cytosolic iron-sulfur pr...761.1     35     28     53
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
624Q24338    425   ESC_DROME Polycomb protein esc OS=Drosophila ...1160.006     42.4     28     47GO:0035098; C:ESC/E(Z) complex; IDA:FlyBase.::GO:0000790; C:nuclear chromatin; ISS:UniProtKB.
GO:0042802; F:identical protein binding; IPI:IntAct.
GO:0006342; P:chromatin silencing; IPI:FlyBase.::GO:0048096; P:chromatin-mediated maintenance of transcription; NAS:UniProtKB.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0070734; P:histone H3-K27 methylation; IMP:FlyBase.::GO:0051567; P:histone H3-K9 methylation; IC:GOC.::GO:0007517; P:muscle organ development; IMP:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
625P20053    465   PRP4_YEAST U4/U6 small nuclear ribonucleoprot...1531.6     34.7     24     47GO:0046540; C:U4/U6 x U5 tri-snRNP complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IPI:SGD.
626Q7K1Y4    335   CIAO1_DROME Probable cytosolic iron-sulfur pr...751.9     34.3     28     52
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
627P74598    348   Y1491_SYNY3 Uncharacterized WD repeat-contain...1126.1     32.7     27     45GO:0030288; C:outer membrane-bounded periplasmic space; IDA:UniProtKB.
628Q6GMD2    305   WDR61_XENLA WD repeat-containing protein 61 O...1870.37     36.2     23     41GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0045638; P:negative regulation of myeloid cell differentiation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
629Q8SRK1    384   HAT2_ENCCU Histone acetyltransferase type B s...960.006     42.4     30     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
630Q1DIW7    668   MDV1_COCIM Mitochondrial division protein 1 O...425.6     33.1     43     57GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
631Q6FNJ1    528   IPI3_CANGA Pre-rRNA-processing protein IPI3 O...1210.006     42.4     29     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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