Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YGL004C
Length:
417
Number of sequences:
5887
Description:
YGL004C RPN14 SGDID:S000002972, Chr VII from 491956-490703, Genome Release 64-1-1, reverse complement, Verified ORF, "Proteasome-interacting protein involved in the assembly of the base subcomplex of the 19S proteasome regulatory particle (RP); null mutants accumulate ubiquitinated Gcn4p and display decreased 26S proteasome stability; interacts with Rpt5p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
541Q27954    1224   COPA_BOVIN Coatomer subunit alpha OS=Bos taur...1040.2     37.7     28     46GO:0030126; C:COPI vesicle coat; IDA:UniProtKB.::GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0005179; F:hormone activity; IEA:UniProtKB-KW.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006891; P:intra-Golgi vesicle-mediated transport; TAS:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:UniProtKB.
542Q4I7X1    612   PFS2_GIBZE Polyadenylation factor subunit 2 O...980.072     38.9     22     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
543Q08706    341   GBB_LYMST Guanine nucleotide-binding protein ...700.38     36.6     26     43
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
544Q0D0X6    446   LIS1_ASPTN Nuclear distribution protein nudF ...600.77     35.8     32     53GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
545O45040    340   GBB1_HOMAM Guanine nucleotide-binding protein...1962.5     33.9     20     37
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
546P36408    347   GBB_DICDI Guanine nucleotide-binding protein ...672     34.3     25     43GO:0005834; C:heterotrimeric G-protein complex; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0031682; F:G-protein gamma-subunit binding; IDA:dictyBase.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007190; P:activation of adenylate cyclase activity; TAS:dictyBase.::GO:0031152; P:aggregation involved in sorocarp development; IMP:dictyBase.::GO:0043327; P:chemotaxis to cAMP; IMP:dictyBase.::GO:0043326; P:chemotaxis to folate; IMP:dictyBase.::GO:0007188; P:G-protein signaling, coupled to cAMP nucleotide second messenger; IDA:dictyBase.::GO:0032320; P:positive regulation of Ras GTPase activity; IMP:dictyBase.::GO:0030826; P:regulation of cGMP biosynthetic process; TAS:dictyBase.
547A6QM06    1278   SCAP_BOVIN Sterol regulatory element-binding ...860.055     39.7     28     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
548Q5MNU5    1279   SCAP_PIG Sterol regulatory element-binding pr...860.055     39.7     28     44GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
549Q921C3    2304   BRWD1_MOUSE Bromodomain and WD repeat-contain...710.001     44.7     32     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.::GO:0008360; P:regulation of cell shape; ISS:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
550B7QKS1    315   CIAO1_IXOSC Probable cytosolic iron-sulfur pr...770.001     43.9     30     51
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
551Q55FR9    1221   COPA_DICDI Coatomer subunit alpha OS=Dictyost...1120.022     40.8     24     41GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
552Q91WM3    475   U3IP2_MOUSE U3 small nucleolar RNA-interactin...2630.062     39.3     22     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
553Q9D2V7    922   CORO7_MOUSE Coronin-7 OS=Mus musculus (Mouse)...730.002     44.7     30     56GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
554Q6PBD6    305   WDR61_XENTR WD repeat-containing protein 61 O...940.9     35     26     45GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
555P40968    455   PRP17_YEAST Pre-mRNA-processing factor 17 OS=...680.029     40     32     50GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000350; P:generation of catalytic spliceosome for second transesterification step; IMP:SGD.::GO:0000389; P:nuclear mRNA 3'-splice site recognition; IGI:SGD.::GO:0000348; P:nuclear mRNA branch site recognition; IGI:SGD.
556Q5F3K4    678   WDR48_CHICK WD repeat-containing protein 48 O...2480.005     42.7     22     39GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
557Q9Y263    795   PLAP_HUMAN Phospholipase A-2-activating prote...760.63     36.2     28     53
GO:0016005; F:phospholipase A2 activator activity; TAS:ProtInc.
GO:0006644; P:phospholipid metabolic process; TAS:ProtInc.::GO:0007165; P:signal transduction; TAS:ProtInc.
558Q0CY32    673   SCONB_ASPTN Probable E3 ubiquitin ligase comp...729.7     32.3     25     46
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
559Q6CG48    437   LIS1_YARLI Nuclear distribution protein PAC1 ...604.1     33.1     32     53GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
560O74340    436   DCA13_SCHPO Protein sof1 OS=Schizosaccharomyc...1020.002     43.5     26     51GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0032040; C:small-subunit processome; ISS:PomBase.::GO:0005819; C:spindle; IDA:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
561B4MY77    335   CIAO1_DROWI Probable cytosolic iron-sulfur pr...445.1     32.7     36     55
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
562P54319    795   PLAP_RAT Phospholipase A-2-activating protein...711.8     34.7     28     52
563Q7KWK5    514   PRP19_DICDI Pre-mRNA-processing factor 19 hom...2750.002     43.5     21     43GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; ISS:dictyBase.::GO:0000151; C:ubiquitin ligase complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; ISS:dictyBase.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:dictyBase.
564A3LNI7    524   LIS1_PICST Nuclear distribution protein PAC1 ...461.5     34.7     37     57GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
565Q9DAW6    521   PRP4_MOUSE U4/U6 small nuclear ribonucleoprot...1228.9     32.3     24     39GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
566Q8BH57    676   WDR48_MOUSE WD repeat-containing protein 48 O...830.013     41.6     31     46GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
567Q5XX13    1052   FBW10_HUMAN F-box/WD repeat-containing protei...890.003     43.9     27     48
568C7GWC1    494   LIS1_YEAS2 Nuclear distribution protein PAC1 ...3370.015     41.2     23     38GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
569O94394    369   YQF1_SCHPO Uncharacterized WD repeat-containi...563.9     33.5     29     57GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
570Q6CU55    439   LIS1_KLULA Nuclear distribution protein PAC1 ...1100.003     43.5     30     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
571P36130    643   CAF4_YEAST CCR4-associated factor 4 OS=Saccha...1100.38     36.6     23     46GO:0030014; C:CCR4-NOT complex; IDA:SGD.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0000266; P:mitochondrial fission; IMP:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:SGD.
records
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