Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YFR051C
Length:
546
Number of sequences:
5887
Description:
YFR051C RET2 SGDID:S000001947, Chr VI from 251803-250163, Genome Release 64-1-1, reverse complement, Verified ORF, "Delta subunit of the coatomer complex (COPI), which coats Golgi-derived transport vesicles; involved in retrograde transport between Golgi and ER"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q84WL9    142   AP2S_ARATH AP-2 complex subunit sigma OS=Arab...1500.41     35.4     21     43GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0008565; F:protein transporter activity; IEA:InterPro.
32Q9HFE5    426   AP1M1_SCHPO AP-1 complex subunit mu-1 OS=Schi...1210.86     35.8     21     44GO:0030121; C:AP-1 adaptor complex; IDA:PomBase.::GO:0032153; C:cell division site; IDA:PomBase.::GO:0051286; C:cell tip; IDA:PomBase.::GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005768; C:endosome; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0030276; F:clathrin binding; ISS:PomBase.
GO:0016197; P:endosome transport; IMP:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0071775; P:regulation of cell cycle cytokinesis; IMP:PomBase.::GO:0060237; P:regulation of fungal-type cell wall organization; IMP:PomBase.::GO:0032889; P:regulation of vacuole fusion, non-autophagic; IMP:PomBase.
33Q9P7N2    162   AP1S1_SCHPO AP-1 complex subunit sigma-1 OS=S...1370.94     34.7     20     46GO:0030121; C:AP-1 adaptor complex; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005768; C:endosome; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0030276; F:clathrin binding; ISS:PomBase.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0016197; P:endosome transport; IMP:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.
34O23685    162   AP1S2_ARATH AP-1 complex subunit sigma-2 OS=A...1231.4     34.3     20     50GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
35P35603    441   AP2M_CAEEL AP-2 complex subunit mu OS=Caenorh...1341.6     35     22     46GO:0030122; C:AP-2 adaptor complex; NAS:UniProtKB.::GO:0008021; C:synaptic vesicle; IDA:WormBase.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0006886; P:intracellular protein transport; NAS:UniProtKB.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0018996; P:molting cycle, collagen and cuticulin-based cuticle; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0010940; P:positive regulation of necrotic cell death; IGI:WormBase.::GO:0061357; P:positive regulation of Wnt protein secretion; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
36Q5VYJ5    1473   CJ112_HUMAN MAM and LDL-receptor class A doma...671.8     35.4     36     45GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
37A1DB29    812   SIP5_NEOFI Protein sip5 OS=181) (Aspergillus ...492.8     34.7     47     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
38Q4WCJ7    812   SIP5_ASPFU Protein sip5 OS=A1100) (Aspergillu...492.9     34.7     47     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
39B0YA45    812   SIP5_ASPFC Protein sip5 OS=(Aspergillus fumig...493     34.3     47     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
40A1VG83    1079   IF2_DESVV Translation initiation factor IF-2 ...983.5     34.3     28     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
41Q72ER1    1079   IF2_DESVH Translation initiation factor IF-2 ...983.5     34.3     28     36GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
42P56377    157   AP1S2_HUMAN AP-1 complex subunit sigma-2 OS=H...1164.8     32.7     22     46GO:0030119; C:AP-type membrane coat adaptor complex; TAS:ProtInc.::GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0030659; C:cytoplasmic vesicle membrane; TAS:Reactome.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0000139; C:Golgi membrane; TAS:Reactome.::GO:0005765; C:lysosomal membrane; TAS:Reactome.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0016044; P:cellular membrane organization; TAS:Reactome.::GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006892; P:post-Golgi vesicle-mediated transport; TAS:Reactome.::GO:0050690; P:regulation of defense response to virus by virus; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
43Q9VV73    841   NXF2_DROME Nuclear RNA export factor 2 OS=Dro...2395.8     33.5     22     36GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005654; C:nucleoplasm; IDA:FlyBase.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.
44Q9DB50    160   AP1S2_MOUSE AP-1 complex subunit sigma-2 OS=M...1165.8     32.3     22     46GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0030659; C:cytoplasmic vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
45Q3ZBS3    160   AP1S2_BOVIN AP-1 complex subunit sigma-2 OS=B...1165.8     32.3     22     46GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0030659; C:cytoplasmic vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
46Q8LEZ8    161   AP1S1_ARATH AP-1 complex subunit sigma-1 OS=A...1236.1     32.3     19     48GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
47Q96PC3    154   AP1S3_HUMAN AP-1 complex subunit sigma-3 OS=H...1096.1     32.3     24     46GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0030659; C:cytoplasmic vesicle membrane; TAS:Reactome.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0000139; C:Golgi membrane; TAS:Reactome.::GO:0005765; C:lysosomal membrane; TAS:Reactome.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0016044; P:cellular membrane organization; TAS:Reactome.::GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006892; P:post-Golgi vesicle-mediated transport; TAS:Reactome.::GO:0050690; P:regulation of defense response to virus by virus; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
48P54672    439   AP2M_DICDI AP-2 complex subunit mu OS=Dictyos...1229.9     32.7     21     43GO:0030122; C:AP-2 adaptor complex; ISS:dictyBase.::GO:0031201; C:SNARE complex; IDA:dictyBase.
GO:0005515; F:protein binding; IPI:dictyBase.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
records
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