Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YFR051C
Length:
546
Number of sequences:
5887
Description:
YFR051C RET2 SGDID:S000001947, Chr VI from 251803-250163, Genome Release 64-1-1, reverse complement, Verified ORF, "Delta subunit of the coatomer complex (COPI), which coats Golgi-derived transport vesicles; involved in retrograde transport between Golgi and ER"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P43621    546   COPD_YEAST Coatomer subunit delta OS=Saccharo...5460     1125     100     100GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030126; C:COPI vesicle coat; IMP:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0048313; P:Golgi inheritance; IGI:SGD.::GO:0051645; P:Golgi localization; IGI:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
2Q66H80    511   COPD_RAT Coatomer subunit delta OS=Rattus nor...5154e-72     245     34     52GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
3P53619    511   COPD_BOVIN Coatomer subunit delta OS=Bos taur...5066e-72     244     33     53GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030126; C:COPI vesicle coat; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006891; P:intra-Golgi vesicle-mediated transport; TAS:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:UniProtKB.
4Q5RA77    511   COPD_PONAB Coatomer subunit delta OS=Pongo ab...5157e-72     244     34     52GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
5Q5XJY5    511   COPD_MOUSE Coatomer subunit delta OS=Mus musc...5159e-72     244     34     52GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
6P48444    511   COPD_HUMAN Coatomer subunit delta OS=Homo sap...5061e-71     243     33     53GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030126; C:COPI vesicle coat; ISS:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.
GO:0048205; P:COPI coating of Golgi vesicle; TAS:Reactome.::GO:0006886; P:intracellular protein transport; TAS:ProtInc.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:Reactome.
7Q5ZL57    510   COPD_CHICK Coatomer subunit delta OS=Gallus g...5201e-68     236     33     52GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
8Q55EZ6    540   COPD_DICDI Coatomer subunit delta OS=Dictyost...5774e-66     229     30     50GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
9Q0DJA0    524   COPD1_ORYSJ Coatomer subunit delta-1 OS=Oryza...5262e-59     211     30     50GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
10P49661    518   COPD3_ORYSJ Coatomer subunit delta-3 OS=Oryza...5264e-59     210     31     51GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
11Q0DJ99    523   COPD2_ORYSJ Coatomer subunit delta-2 OS=Oryza...5221e-58     209     31     51GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
12Q93Y22    527   COPD_ARATH Coatomer subunit delta OS=Arabidop...5392e-58     208     28     51GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
13O74496    240   COPD_SCHPO Coatomer subunit delta OS=Schizosa...1786e-58     199     57     76GO:0030126; C:COPI vesicle coat; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; ISS:PomBase.
14Q09236    515   COPD_CAEEL Probable coatomer subunit delta OS...5552e-52     191     29     49GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.
GO:0006915; P:apoptotic process; IMP:WormBase.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0018996; P:molting cycle, collagen and cuticulin-based cuticle; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
15Q0J649    376   COPD4_ORYSJ Coatomer subunit delta-4 OS=Oryza...3380.0000000000001     76.3     24     43GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
16P62744    142   AP2S1_RAT AP-2 complex subunit sigma OS=Rattu...1360.00001     48.5     21     46GO:0030121; C:AP-1 adaptor complex; TAS:RGD.::GO:0030122; C:AP-2 adaptor complex; IDA:MGI.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
17Q5R940    142   AP2S1_PONAB AP-2 complex subunit sigma OS=Pon...1360.00001     48.5     21     46GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
18P62743    142   AP2S1_MOUSE AP-2 complex subunit sigma OS=Mus...1360.00001     48.5     21     46
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
19P53680    142   AP2S1_HUMAN AP-2 complex subunit sigma OS=Hom...1360.00001     48.5     21     46GO:0030122; C:AP-2 adaptor complex; TAS:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.
GO:0008565; F:protein transporter activity; NAS:UniProtKB.
GO:0007411; P:axon guidance; TAS:Reactome.::GO:0048268; P:clathrin coat assembly; TAS:UniProtKB.::GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0042059; P:negative regulation of epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0050690; P:regulation of defense response to virus by virus; TAS:Reactome.::GO:0030100; P:regulation of endocytosis; TAS:UniProtKB.::GO:0007268; P:synaptic transmission; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
20Q17QC5    142   AP2S1_BOVIN AP-2 complex subunit sigma OS=Bos...1360.00001     48.5     21     46GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
21Q4ICG5    143   AP2S_GIBZE AP-2 complex subunit sigma OS=(Whe...1410.0004     44.3     20     47GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0008565; F:protein transporter activity; IEA:InterPro.
22Q7SAQ1    143   AP2S_NEUCR AP-2 complex subunit sigma OS=1257...1410.0004     44.3     21     46GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0008565; F:protein transporter activity; IEA:InterPro.
23Q9Y7L6    143   AP2S_SCHPO AP-2 complex subunit sigma OS=Schi...1170.0007     43.5     22     48GO:0030122; C:AP-2 adaptor complex; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IC:PomBase.::GO:0016192; P:vesicle-mediated transport; ISS:PomBase.
24Q54H39    142   AP2S_DICDI AP-2 complex subunit sigma OS=Dict...1190.015     39.7     23     45GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0008565; F:protein transporter activity; IEA:InterPro.
25Q9WVL1    144   AP4S1_MOUSE AP-4 complex subunit sigma-1 OS=M...1160.04     38.5     22     51GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0005802; C:trans-Golgi network; TAS:MGI.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; TAS:MGI.::GO:0016192; P:vesicle-mediated transport; TAS:MGI.
26Q9Y587    144   AP4S1_HUMAN AP-4 complex subunit sigma-1 OS=H...1160.05     38.1     22     50GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
GO:0008565; F:protein transporter activity; IEA:InterPro.
27Q54HS9    428   AP1M_DICDI AP-1 complex subunit mu OS=Dictyos...1440.099     38.9     22     44GO:0030121; C:AP-1 adaptor complex; IDA:dictyBase.
GO:0005515; F:protein binding; IPI:dictyBase.::GO:0008565; F:protein transporter activity; IMP:dictyBase.
GO:0007032; P:endosome organization; IMP:dictyBase.::GO:0006971; P:hypotonic response; IMP:dictyBase.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0007041; P:lysosomal transport; IMP:dictyBase.::GO:0007275; P:multicellular organismal development; IMP:dictyBase.
28Q7TN05    154   AP1S3_MOUSE AP-1 complex subunit sigma-3 OS=M...1430.12     37.4     20     44GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0030659; C:cytoplasmic vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
29Q3ZBB6    144   AP4S1_BOVIN AP-4 complex subunit sigma-1 OS=B...1160.2     36.2     22     50GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
GO:0008565; F:protein transporter activity; IEA:InterPro.
30Q00776    475   AP1M1_YEAST AP-1 complex subunit mu-1-I OS=Sa...1220.21     38.1     22     46GO:0030121; C:AP-1 adaptor complex; IPI:SGD.::GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.
GO:0030276; F:clathrin binding; IPI:SGD.
GO:0006896; P:Golgi to vacuole transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
31Q84WL9    142   AP2S_ARATH AP-2 complex subunit sigma OS=Arab...1500.41     35.4     21     43GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0008565; F:protein transporter activity; IEA:InterPro.
records
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