Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YFR038W
Length:
853
Number of sequences:
5887
Description:
YFR038W IRC5 SGDID:S000001934, Chr VI from 229380-231941, Genome Release 64-1-1, Verified ORF, "Putative ATPase containing the DEAD/H helicase-related sequence motif; null mutant displays increased levels of spontaneous Rad52p foci"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
121P0CO18    1246   SWR1_CRYNJ Helicase SWR1 OS=ATCC MYA-565) (Fi...3205e-38     157     32     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
122P0CO19    1246   SWR1_CRYNB Helicase SWR1 OS=(Filobasidiella n...3205e-38     157     32     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
123B4NXB8    784   RAD54_DROYA DNA repair and recombination prot...5546e-53     201     29     48GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
124O12944    733   RAD54_CHICK DNA repair and recombination prot...5498e-53     200     31     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
125B3MMA5    791   RAD54_DROAN DNA repair and recombination prot...5548e-53     201     29     49GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
126Q7S133    1845   SWR1_NEUCR Helicase swr-1 OS=1257 / FGSC 987)...1558e-35     147     46     66GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
127P41410    852   RAD54_SCHPO DNA repair protein rhp54 OS=Schiz...6028e-52     198     28     45GO:0005634; C:nucleus; IDA:PomBase.::GO:0005819; C:spindle; IDA:PomBase.
GO:0005524; F:ATP binding; IC:PomBase.::GO:0015616; F:DNA translocase activity; ISS:PomBase.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0033170; F:protein-DNA loading ATPase activity; TAS:PomBase.
GO:0006338; P:chromatin remodeling; ISS:PomBase.::GO:0000724; P:double-strand break repair via homologous recombination; ISS:PomBase.::GO:0030491; P:heteroduplex formation; ISS:PomBase.::GO:0006311; P:meiotic gene conversion; IMP:PomBase.::GO:0007131; P:reciprocal meiotic recombination; IMP:PomBase.
128B4MX21    784   RAD54_DROWI DNA repair and recombination prot...5521e-51     197     30     48GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
129P32657    1468   CHD1_YEAST Chromo domain-containing protein 1...1611e-40     166     50     68GO:0005739; C:mitochondrion; IDA:SGD.::GO:0030874; C:nucleolar chromatin; IDA:SGD.::GO:0000124; C:SAGA complex; IDA:SGD.::GO:0046695; C:SLIK (SAGA-like) complex; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0031490; F:chromatin DNA binding; IDA:SGD.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0035064; F:methylated histone residue binding; IDA:SGD.::GO:0000182; F:rDNA binding; IDA:SGD.
GO:0043044; P:ATP-dependent chromatin remodeling; IDA:SGD.::GO:0071441; P:negative regulation of histone H3-K14 acetylation; IMP:SGD.::GO:2000616; P:negative regulation of histone H3-K9 acetylation; IMP:SGD.::GO:0042766; P:nucleosome mobilization; IDA:SGD.::GO:0016584; P:nucleosome positioning; IDA:SGD.::GO:0034401; P:regulation of transcription by chromatin organization; IMP:SGD.::GO:0001178; P:regulation of transcriptional start site selection at RNA polymerase II promoter; IGI:SGD.::GO:0006369; P:termination of RNA polymerase II transcription; IMP:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IGI:SGD.
130B4M9A8    786   RAD54_DROVI DNA repair and recombination prot...5482e-50     193     28     47GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
131B4KHL5    783   RAD54_DROMO DNA repair and recombination prot...5472e-50     193     28     46GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
132B4JCS7    786   RAD54_DROGR DNA repair and recombination prot...5541e-49     191     28     47GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0043150; P:DNA synthesis involved in double-strand break repair via homologous recombination; ISS:UniProtKB.::GO:0000711; P:meiotic DNA repair synthesis; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010212; P:response to ionizing radiation; ISS:UniProtKB.
133O14139    1388   HRP3_SCHPO Chromodomain helicase hrp3 OS=Schi...1646e-42     170     50     68GO:0031934; C:mating-type region heterochromatin; IDA:PomBase.::GO:0000790; C:nuclear chromatin; NAS:PomBase.
GO:0005524; F:ATP binding; IC:PomBase.::GO:0004003; F:ATP-dependent DNA helicase activity; IDA:PomBase.::GO:0003677; F:DNA binding; NAS:PomBase.::GO:0005515; F:protein binding; IPI:PomBase.
GO:0006338; P:chromatin remodeling; NAS:PomBase.::GO:0030466; P:chromatin silencing at silent mating-type cassette; IMP:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0060303; P:regulation of nucleosome density; IMP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
134A4IHD2    1396   ARIP4_XENTR Helicase ARIP4 OS=Xenopus tropica...6523e-45     180     27     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
135Q03468    1493   ERCC6_HUMAN DNA excision repair protein ERCC-...1542e-24     114     38     58GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005625; C:soluble fraction; IDA:UniProtKB.::GO:0008023; C:transcription elongation factor complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IDA:UniProtKB.::GO:0003682; F:chromatin binding; IDA:UniProtKB.::GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0008094; F:DNA-dependent ATPase activity; IDA:UniProtKB.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0047485; F:protein N-terminus binding; IPI:UniProtKB.
GO:0006284; P:base-excision repair; IMP:UniProtKB.::GO:0032786; P:positive regulation of transcription elongation, DNA-dependent; IDA:UniProtKB.::GO:0006366; P:transcription from RNA polymerase II promoter; NAS:UniProtKB.::GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:UniProtKB.
136O43065    1953   MOT1_SCHPO Probable helicase mot1 OS=Schizosa...1404e-23     109     42     59GO:0005634; C:nucleus; IC:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:PomBase.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0017025; F:TBP-class protein binding; ISS:PomBase.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:PomBase.
137Q9UR24    973   RHP26_SCHPO DNA repair protein rhp26 OS=Schiz...2192e-28     126     35     55GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:PomBase.
138P40352    1085   RAD26_YEAST DNA repair and recombination prot...1585e-27     122     37     63GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:SGD.
139Q4DCH3    1086   JBP2_TRYCC Bifunctional helicase and thymine ...5467e-34     144     26     46GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0050341; F:thymine dioxygenase activity; IEA:EC.
140Q8BHK9    1240   ERC6L_MOUSE DNA excision repair protein ERCC-...1545e-27     122     41     62GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
141O14981    1849   BTAF1_HUMAN TATA-binding protein-associated f...1366e-23     109     43     58GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.
GO:0045892; P:negative regulation of transcription, DNA-dependent; NAS:UniProtKB.
142A6QQR4    1242   ERC6L_BOVIN DNA excision repair protein ERCC-...1623e-26     120     39     60GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
143A4HVU6    1098   JBP2_LEIIN Bifunctional helicase and thymine ...5341e-32     140     26     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0050341; F:thymine dioxygenase activity; IEA:EC.
144Q8CHI8    3072   EP400_MOUSE E1A-binding protein p400 OS=Mus m...1568e-23     109     42     59GO:0035267; C:NuA4 histone acetyltransferase complex; ISS:UniProtKB.::GO:0016607; C:nuclear speck; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0043968; P:histone H2A acetylation; ISS:UniProtKB.::GO:0043967; P:histone H4 acetylation; ISS:UniProtKB.
145B6EU02    1098   JBP2_LEITA Bifunctional helicase and thymine ...5278e-32     137     25     44GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0050341; F:thymine dioxygenase activity; TAS:UniProtKB.
GO:0070580; P:base J metabolic process; IMP:UniProtKB.
146Q4QFY1    1098   JBP2_LEIMA Bifunctional helicase and thymine ...5341e-31     137     25     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0050341; F:thymine dioxygenase activity; IEA:EC.
147Q2NKX8    1250   ERC6L_HUMAN DNA excision repair protein ERCC-...1623e-27     122     41     61GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; TAS:Reactome.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.
148P47264    1031   Y018_MYCGE Uncharacterized ATP-dependent heli...1372e-16     88.2     35     53
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
149A4H7G5    1098   JBP2_LEIBR Bifunctional helicase and thymine ...5301e-30     133     25     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.::GO:0050341; F:thymine dioxygenase activity; IEA:EC.
150Q96L91    3159   EP400_HUMAN E1A-binding protein p400 OS=Homo ...1869e-22     105     38     55GO:0035267; C:NuA4 histone acetyltransferase complex; IDA:UniProtKB.::GO:0016607; C:nuclear speck; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0043968; P:histone H2A acetylation; IDA:UniProtKB.::GO:0043967; P:histone H4 acetylation; IDA:UniProtKB.
151Q92698    747   RAD54_HUMAN DNA repair and recombination prot...1521e-23     110     38     57GO:0005634; C:nucleus; TAS:ProtInc.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0007126; P:meiosis; TAS:ProtInc.
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