Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YFR023W
Length:
611
Number of sequences:
5887
Description:
YFR023W PES4 SGDID:S000001919, Chr VI from 199874-201709, Genome Release 64-1-1, Verified ORF, "Poly(A) binding protein, suppressor of DNA polymerase epsilon mutation, similar to Mip6p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631Q3SZM1    296   MK67I_BOVIN MKI67 FHA domain-interacting nucl...734.7     33.5     26     52GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0010923; P:negative regulation of phosphatase activity; ISS:UniProtKB.
632P0C1I2    315   PPIE_RHIO9 Peptidyl-prolyl cis-trans isomeras...754.7     33.5     23     52
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006457; P:protein folding; IEA:UniProtKB-KW.
633Q10MR0    232   RU2B_ORYSJ U2 small nuclear ribonucleoprotein...1984.8     33.1     22     38GO:0015030; C:Cajal body; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005686; C:U2 snRNP; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro.
634Q91WT8    590   RBM47_MOUSE RNA-binding protein 47 OS=Mus mus...704.8     33.9     27     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
635Q42404    427   RU17_ARATH U1 small nuclear ribonucleoprotein...1084.8     33.9     25     44GO:0005634; C:nucleus; IDA:TAIR.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:TAIR.
636Q8BZX4    494   SREK1_MOUSE Splicing regulatory glutamine/lys...724.8     33.9     25     53GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
637B8AM21    232   RU2B_ORYSI U2 small nuclear ribonucleoprotein...1985     33.1     22     38GO:0015030; C:Cajal body; ISS:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005686; C:U2 snRNP; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IEA:InterPro.
638P86049    533   RBM46_MOUSE Probable RNA-binding protein 46 O...925.1     33.9     25     49
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
639P53883    403   NOP13_YEAST Nucleolar protein 13 OS=Saccharom...725.4     33.5     24     57GO:0005730; C:nucleolus; IDA:SGD.::GO:0030684; C:preribosome; IDA:SGD.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
640Q96IZ5    413   RBM41_HUMAN RNA-binding protein 41 OS=Homo sa...927.9     33.1     25     47
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
641O22922    232   RU2B1_ARATH U2 small nuclear ribonucleoprotei...2025.6     33.1     23     38GO:0015030; C:Cajal body; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005686; C:U2 snRNP; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro.
GO:0000354; P:cis assembly of pre-catalytic spliceosome; TAS:TAIR.
642Q8BIF2    374   RFOX3_MOUSE RNA binding protein fox-1 homolog...365.7     33.5     39     67GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0043025; C:neuronal cell body; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0003677; F:DNA binding; IDA:MGI.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
643P38741    713   RIM4_YEAST Meiotic activator RIM4 OS=Saccharo...1845.9     33.5     23     43GO:0005737; C:cytoplasm; IDA:SGD.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IMP:SGD.
GO:0006279; P:premeiotic DNA replication; IMP:SGD.::GO:0007131; P:reciprocal meiotic recombination; IMP:SGD.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IGI:SGD.
644Q9BYG3    293   MK67I_HUMAN MKI67 FHA domain-interacting nucl...716.2     33.1     27     52GO:0000794; C:condensed nuclear chromosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IDA:UniProtKB.
GO:0010923; P:negative regulation of phosphatase activity; IDA:UniProtKB.::GO:0006461; P:protein complex assembly; NAS:UniProtKB.::GO:0016072; P:rRNA metabolic process; NAS:UniProtKB.::GO:0009303; P:rRNA transcription; NAS:UniProtKB.
645Q4KMD3    208   U1SBP_DANRE U11/U12 small nuclear ribonucleop...846.3     32.7     23     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
646Q6YPW4    540   PYRG_ONYPE CTP synthase OS=Onion yellows phyt...1236.3     33.5     25     41
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003883; F:CTP synthase activity; IEA:EC.
GO:0006541; P:glutamine metabolic process; IEA:UniProtKB-KW.::GO:0006221; P:pyrimidine nucleotide biosynthetic process; IEA:UniProtKB-KW.
647Q20870    499   DAZ1_CAEEL DAZ protein 1 OS=Caenorhabditis el...626.5     33.5     31     60GO:0005737; C:cytoplasm; IDA:WormBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0048477; P:oogenesis; IEA:UniProtKB-KW.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
648Q0P4R6    534   RBM46_XENTR Probable RNA-binding protein 46 O...926.5     33.5     26     50
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
649Q8LPQ9    901   FPA_ARATH Flowering time control protein FPA ...736.6     33.5     30     47GO:0000785; C:chromatin; IDA:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0031048; P:chromatin silencing by small RNA; IMP:TAIR.::GO:0009790; P:embryo development; IGI:TAIR.::GO:0009553; P:embryo sac development; IGI:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006378; P:mRNA polyadenylation; IDA:UniProtKB.::GO:0009911; P:positive regulation of flower development; IMP:TAIR.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0010228; P:vegetative to reproductive phase transition of meristem; IMP:TAIR.
650Q44560    102   RBPA_NOSS1 Putative RNA-binding protein rbpA ...726.8     31.2     24     56
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
651Q6K4N0    185   RSZ21_ORYSJ Serine/arginine-rich splicing fac...616.8     32.7     30     54
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
652Q6Z1C0    572   NUCL1_ORYSJ Nucleolin 1 OS=Oryza sativa subsp...727     33.5     28     57
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.
653Q754W7    218   NCBP2_ASHGO Nuclear cap-binding protein subun...727.3     32.7     28     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
654Q5SNN4    482   C3H40_ORYSJ Zinc finger CCCH domain-containin...927.4     33.1     26     49
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
655P28048    428   LAA_XENLA Lupus La protein homolog A OS=Xenop...647.6     33.1     25     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006396; P:RNA processing; IEA:InterPro.
656Q95KI0    376   RFOX1_MACFA RNA binding protein fox-1 homolog...588.1     33.1     26     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
657Q55FQ0    459   RU17_DICDI U1 small nuclear ribonucleoprotein...748.3     33.1     26     53GO:0005681; C:spliceosomal complex; ISS:UniProtKB.::GO:0005685; C:U1 snRNP; ISS:dictyBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0043484; P:regulation of RNA splicing; ISS:UniProtKB.
658O73932    594   IF23A_XENLA Insulin-like growth factor 2 mRNA...1518.5     33.1     21     47GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IPI:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
659Q9Z118    523   PTBP3_RAT Polypyrimidine tract-binding protei...1418.5     33.1     22     43GO:0005634; C:nucleus; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:RGD.
GO:0043249; P:erythrocyte maturation; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0045595; P:regulation of cell differentiation; IMP:RGD.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
660Q9JJ43    396   RFOX1_MOUSE RNA binding protein fox-1 homolog...588.6     32.7     26     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
661Q8BHD7    523   PTBP3_MOUSE Polypyrimidine tract-binding prot...1418.7     33.1     22     43GO:0005634; C:nucleus; IEA:InterPro.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0043249; P:erythrocyte maturation; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
records
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