Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YFR023W
Length:
611
Number of sequences:
5887
Description:
YFR023W PES4 SGDID:S000001919, Chr VI from 199874-201709, Genome Release 64-1-1, Verified ORF, "Poly(A) binding protein, suppressor of DNA polymerase epsilon mutation, similar to Mip6p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
541Q58EA2    256   THO4A_XENLA THO complex subunit 4-A OS=Xenopu...720.7     36.2     28     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
542Q28FB9    260   THOC4_XENTR THO complex subunit 4 OS=Xenopus ...720.7     36.2     28     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
543Q23121    312   RSP1_CAEEL Probable splicing factor, arginine...700.77     36.2     29     54GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0001703; P:gastrulation with mouth forming first; IMP:WormBase.::GO:0008406; P:gonad development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040026; P:positive regulation of vulval development; IMP:WormBase.::GO:0008380; P:RNA splicing; NAS:UniProtKB.::GO:0007283; P:spermatogenesis; IGI:UniProtKB.
544Q640A2    297   HNRDL_XENTR Heterogeneous nuclear ribonucleop...1490.77     36.2     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
545Q9SD61    352   C3H42_ARATH Zinc finger CCCH domain-containin...720.78     36.2     29     51
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
546O14369    388   SCE3_SCHPO Probable RNA-binding protein sce3 ...1350.78     36.2     24     44GO:0005829; C:cytosol; IDA:PomBase.::GO:0005840; C:ribosome; ISS:PomBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; ISS:PomBase.
GO:0002183; P:cytoplasmic translational initiation; NAS:PomBase.
547Q1RMJ7    287   TSAP1_BOVIN tRNA selenocysteine 1-associated ...1730.79     35.8     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
548Q8STN7    161   Y9E7_ENCCU RRM domain-containing protein ECU0...950.8     35     25     44
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
549Q9Y580    266   RBM7_HUMAN RNA-binding protein 7 OS=Homo sapi...720.82     35.8     32     50
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.
550Q6ZK57    653   C3H54_ORYSJ Zinc finger CCCH domain-containin...1140.82     36.6     18     50
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
551Q9NQ94    594   A1CF_HUMAN APOBEC1 complementation factor OS=...720.82     36.2     32     51GO:0030895; C:apolipoprotein B mRNA editing enzyme complex; IDA:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003727; F:single-stranded RNA binding; IDA:UniProtKB.
GO:0016554; P:cytidine to uridine editing; TAS:Reactome.::GO:0016556; P:mRNA modification; TAS:Reactome.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0050821; P:protein stabilization; IDA:UniProtKB.
552Q24562    416   U2AF2_DROME Splicing factor U2AF 50 kDa subun...840.82     36.2     27     44GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0005686; C:U2 snRNP; TAS:FlyBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008187; F:poly-pyrimidine tract binding; IDA:FlyBase.::GO:0005515; F:protein binding; IPI:FlyBase.
GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0051168; P:nuclear export; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:FlyBase.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IMP:FlyBase.
553Q5VZ19    366   TDR10_HUMAN Tudor domain-containing protein 1...1250.84     36.2     25     40
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
554Q9U1N0    535   HRP65_CHITE Hrp65 protein OS=Chironomus tenta...1560.89     36.2     24     42GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.
GO:0006406; P:mRNA export from nucleus; NAS:UniProtKB.
555A9JTS5    843   STPAP_XENTR Speckle targeted PIP5K1A-regulate...1620.9     36.2     20     44GO:0016607; C:nuclear speck; ISS:UniProtKB.::GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0004652; F:polynucleotide adenylyltransferase activity; ISS:UniProtKB.::GO:0050265; F:RNA uridylyltransferase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006379; P:mRNA cleavage; ISS:UniProtKB.::GO:0006378; P:mRNA polyadenylation; ISS:UniProtKB.::GO:0016180; P:snRNA processing; ISS:UniProtKB.
556Q9GRW7    697   NONA_DROVI Protein no-on-transient A OS=Droso...1560.91     36.2     24     42
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.::GO:0007601; P:visual perception; IEA:UniProtKB-KW.
557Q05AT9    272   U1SBP_XENLA U11/U12 small nuclear ribonucleop...700.91     35.8     26     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
558Q5R462    287   TSAP1_PONAB tRNA selenocysteine 1-associated ...1730.92     35.8     26     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006412; P:translation; IEA:UniProtKB-KW.
559Q9HCJ3    691   RAVR2_HUMAN Ribonucleoprotein PTB-binding 2 O...750.94     36.2     28     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
560Q66JV4    834   R12BB_MOUSE RNA-binding protein 12B-B OS=Mus ...1660.96     36.2     28     48
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
561Q1HE01    154   NCBP2_BOMMO Nuclear cap-binding protein subun...831.1     34.7     25     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
562Q5ZLP8    584   IF2B3_CHICK Insulin-like growth factor 2 mRNA...1511.1     36.2     23     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003730; F:mRNA 3'-UTR binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
563Q3MHY8    262   RBM7_BOVIN RNA-binding protein 7 OS=Bos tauru...731.1     35.4     32     49
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.
564Q54WM4    233   EIF3G_DICDI Eukaryotic translation initiation...651.1     35.4     28     51GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:dictyBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0006446; P:regulation of translational initiation; ISS:dictyBase.
565Q80YR9    836   R12BA_MOUSE RNA-binding protein 12B-A OS=Mus ...1661.1     36.2     28     48
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
566Q5R9H4    587   A1CF_PONAB APOBEC1 complementation factor OS=...1946.9     33.5     24     44GO:0030895; C:apolipoprotein B mRNA editing enzyme complex; ISS:UniProtKB.::GO:0005783; C:endoplasmic reticulum; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003727; F:single-stranded RNA binding; ISS:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0050821; P:protein stabilization; ISS:UniProtKB.
567B4M205    154   NCB2A_DROVI Nuclear cap-binding protein subun...721.2     34.7     26     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0031047; P:gene silencing by RNA; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
568Q9SVV9    759   AML3_ARATH Protein MEI2-like 3 OS=Arabidopsis...1591.2     35.8     24     44
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0045927; P:positive regulation of growth; IMP:UniProtKB.::GO:0045836; P:positive regulation of meiosis; IMP:UniProtKB.
569Q9SJG8    843   AML2_ARATH Protein MEI2-like 2 OS=Arabidopsis...1721.2     35.8     20     42
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0045927; P:positive regulation of growth; IMP:UniProtKB.::GO:0045836; P:positive regulation of meiosis; IMP:UniProtKB.
570O02008    272   TRA2_DROVI Transformer-2 sex-determining prot...791.2     35.4     22     54
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
571O43390    633   HNRPR_HUMAN Heterogeneous nuclear ribonucleop...652.9     34.7     34     54GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0030530; C:heterogeneous nuclear ribonucleoprotein complex; TAS:ProtInc.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; TAS:ProtInc.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
records
Previous ‹‹ ›› Next Total records: 664 541 - 570
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::