Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YFR004W
Length:
306
Number of sequences:
5887
Description:
YFR004W RPN11 SGDID:S000001900, Chr VI from 153393-154313, Genome Release 64-1-1, Verified ORF, "Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid; couples the deubiquitination and degradation of proteasome substrates; involved, independent of catalytic activity, in fission of mitochondria and peroxisomes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91A7E7B3    367   EIF3H_SCLS1 Eukaryotic translation initiation...1600.000003     52     24     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
92A6RQZ9    367   EIF3H_BOTFB Eukaryotic translation initiation...1550.000003     51.6     25     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
93Q69Z66    819   MYSM1_MOUSE Histone H2A deubiquitinase MYSM1 ...1220.000004     52     31     48GO:0016585; C:chromatin remodeling complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008237; F:metallopeptidase activity; ISS:UniProtKB.::GO:0003713; F:transcription coactivator activity; ISS:UniProtKB.::GO:0004221; F:ubiquitin thiolesterase activity; ISS:UniProtKB.::GO:0004843; F:ubiquitin-specific protease activity; ISS:UniProtKB.
GO:0016578; P:histone deubiquitination; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
94Q8WZY4    352   RPN8_NEUCR 26S proteasome regulatory subunit ...1420.000004     51.2     27     49GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
95A2QQA2    365   EIF3H_ASPNC Eukaryotic translation initiation...1500.000005     50.8     26     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
96Q8VYB5    507   AMSH1_ARATH AMSH-like ubiquitin thioesterase ...1200.000007     50.8     26     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008237; F:metallopeptidase activity; IEA:UniProtKB-KW.
GO:0071108; P:protein K48-linked deubiquitination; ISS:UniProtKB.::GO:0070536; P:protein K63-linked deubiquitination; ISS:UniProtKB.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
97Q6C1I3    347   EIF3H_YARLI Eukaryotic translation initiation...1290.00001     50.1     29     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
98Q5RGA4    822   MYSM1_DANRE Histone H2A deubiquitinase MYSM1 ...1230.00001     50.1     30     49GO:0016585; C:chromatin remodeling complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042393; F:histone binding; ISS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008237; F:metallopeptidase activity; ISS:UniProtKB.::GO:0003713; F:transcription coactivator activity; ISS:UniProtKB.::GO:0004221; F:ubiquitin thiolesterase activity; ISS:UniProtKB.::GO:0004843; F:ubiquitin-specific protease activity; ISS:UniProtKB.
GO:0016578; P:histone deubiquitination; ISS:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
99Q2U2J1    365   EIF3H_ASPOR Eukaryotic translation initiation...1480.00002     49.3     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
100Q4WTA6    365   EIF3H_ASPFU Eukaryotic translation initiation...1490.00002     49.3     26     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
101B0XQB9    365   EIF3H_ASPFC Eukaryotic translation initiation...1490.00002     49.3     26     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
102Q6TH47    418   STBPA_DANRE STAM-binding protein-like A OS=Da...1200.00003     48.9     29     49
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008237; F:metallopeptidase activity; IEA:UniProtKB-KW.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
103Q54Z40    1217   MYBH_DICDI Myb-like protein H OS=Dictyosteliu...1080.00003     48.9     32     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; ISS:dictyBase.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
104Q0D1J4    365   EIF3H_ASPTN Eukaryotic translation initiation...1470.00003     48.5     26     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
105A8QCY3    379   EIF3H_BRUMA Eukaryotic translation initiation...1510.00004     48.1     26     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
106Q63ZM7    416   STABP_XENLA STAM-binding protein-like OS=Xeno...1630.00006     47.8     26     45
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008237; F:metallopeptidase activity; IEA:UniProtKB-KW.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
107Q1DHB6    347   EIF3H_COCIM Eukaryotic translation initiation...1390.0001     46.6     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
108Q7S9Y9    359   EIF3H_NEUCR Eukaryotic translation initiation...1570.0002     46.2     23     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
109A1D379    347   EIF3H_NEOFI Eukaryotic translation initiation...1410.0002     46.2     27     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
110O95630    424   STABP_HUMAN STAM-binding protein OS=Homo sapi...1200.0002     46.2     27     50GO:0005769; C:early endosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:HPA.::GO:0005886; C:plasma membrane; IDA:HPA.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008237; F:metallopeptidase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0007259; P:JAK-STAT cascade; TAS:ProtInc.::GO:0008284; P:positive regulation of cell proliferation; TAS:ProtInc.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
111A1CQB4    365   EIF3H_ASPCL Eukaryotic translation initiation...1480.0002     45.8     25     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
112P0CO84    303   EIF3F_CRYNJ Eukaryotic translation initiation...960.0002     45.8     31     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
113P0CO85    303   EIF3F_CRYNB Eukaryotic translation initiation...960.0002     45.8     31     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
114P26270    338   PSD7_DROME 26S proteasome non-ATPase regulato...1220.0006     44.7     26     47GO:0030425; C:dendrite; IMP:FlyBase.::GO:0008541; C:proteasome regulatory particle, lid subcomplex; ISS:FlyBase.
GO:0004175; F:endopeptidase activity; IDA:FlyBase.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0008283; P:cell proliferation; IMP:FlyBase.::GO:0000022; P:mitotic spindle elongation; IMP:FlyBase.::GO:0006508; P:proteolysis; IDA:FlyBase.
115Q5PNU3    507   AMSH3_ARATH AMSH-like ubiquitin thioesterase ...970.0009     44.3     26     52GO:0016021; C:integral to membrane; IDA:TAIR.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008237; F:metallopeptidase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006897; P:endocytosis; IMP:TAIR.::GO:0046907; P:intracellular transport; IMP:TAIR.::GO:0090316; P:positive regulation of intracellular protein transport; IMP:UniProtKB.::GO:0044090; P:positive regulation of vacuole organization; IMP:UniProtKB.::GO:0071108; P:protein K48-linked deubiquitination; IDA:UniProtKB.::GO:0070536; P:protein K63-linked deubiquitination; IDA:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0007033; P:vacuole organization; IMP:TAIR.
116O74440    324   RPN8_SCHPO 26S proteasome regulatory subunit ...1220.001     43.5     30     48GO:0005829; C:cytosol; IDA:PomBase.::GO:0005635; C:nuclear envelope; IDA:PomBase.::GO:0008541; C:proteasome regulatory particle, lid subcomplex; ISS:PomBase.
GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; NAS:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IC:PomBase.
117Q8R424    424   STABP_RAT STAM-binding protein OS=Rattus norv...1200.001     43.5     25     48GO:0005768; C:endosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008237; F:metallopeptidase activity; IEA:UniProtKB-KW.
GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
118Q4PI64    403   EIF3H_USTMA Eukaryotic translation initiation...1530.001     43.5     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
119Q75F44    326   RPN8_ASHGO 26S proteasome regulatory subunit ...930.001     43.5     30     49GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
120Q9CQ26    424   STABP_MOUSE STAM-binding protein OS=Mus muscu...1200.001     43.5     25     48GO:0005768; C:endosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008237; F:metallopeptidase activity; IEA:UniProtKB-KW.
GO:0006916; P:anti-apoptosis; IMP:MGI.::GO:0006508; P:proteolysis; IEA:UniProtKB-KW.::GO:0007165; P:signal transduction; TAS:MGI.
121O01974    365   EIF3H_CAEEL Eukaryotic translation initiation...1550.003     42.7     24     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0007413; P:axonal fasciculation; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
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