Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YFR004W
Length:
306
Number of sequences:
5887
Description:
YFR004W RPN11 SGDID:S000001900, Chr VI from 153393-154313, Genome Release 64-1-1, Verified ORF, "Metalloprotease subunit of the 19S regulatory particle of the 26S proteasome lid; couples the deubiquitination and degradation of proteasome substrates; involved, independent of catalytic activity, in fission of mitochondria and peroxisomes"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
121O01974    365   EIF3H_CAEEL Eukaryotic translation initiation...1550.003     42.7     24     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0007413; P:axonal fasciculation; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
122Q6FMD8    329   RPN8_CANGA 26S proteasome regulatory subunit ...930.003     42.4     29     51GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
123Q3ZBD0    322   PSD7_BOVIN 26S proteasome non-ATPase regulato...1240.004     42     25     48GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
124Q08723    338   RPN8_YEAST 26S proteasome regulatory subunit ...930.004     42     29     48GO:0008541; C:proteasome regulatory particle, lid subcomplex; IDA:SGD.::GO:0034515; C:proteasome storage granule; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006511; P:ubiquitin-dependent protein catabolic process; TAS:SGD.
125P26516    321   PSD7_MOUSE 26S proteasome non-ATPase regulato...1240.005     41.6     25     48GO:0000502; C:proteasome complex; IEA:UniProtKB-KW.
126P51665    324   PSD7_HUMAN 26S proteasome non-ATPase regulato...1240.005     41.6     25     48GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005838; C:proteasome regulatory particle; TAS:ProtInc.
GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; TAS:Reactome.::GO:0002479; P:antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent; TAS:Reactome.::GO:0006915; P:apoptotic process; TAS:Reactome.::GO:0006977; P:DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest; TAS:Reactome.::GO:0000082; P:G1/S transition of mitotic cell cycle; TAS:Reactome.::GO:0010467; P:gene expression; TAS:Reactome.::GO:0000216; P:M/G1 transition of mitotic cell cycle; TAS:Reactome.::GO:0016071; P:mRNA metabolic process; TAS:Reactome.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0000209; P:protein polyubiquitination; TAS:Reactome.::GO:0042981; P:regulation of apoptotic process; TAS:Reactome.::GO:0006521; P:regulation of cellular amino acid metabolic process; TAS:Reactome.::GO:0000084; P:S phase of mitotic cell cycle; TAS:Reactome.::GO:0044281; P:small molecule metabolic process; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
127A8WVY9    365   EIF3H_CAEBR Eukaryotic translation initiation...770.006     41.6     34     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
128Q0UMR2    364   EIF3H_PHANO Eukaryotic translation initiation...1590.01     40.8     23     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
129Q18967    294   EIF3F_CAEEL Eukaryotic translation initiation...610.023     39.7     30     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
130Q0UTQ6    342   EIF3F_PHANO Eukaryotic translation initiation...1120.039     38.9     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
131Q2GZK0    362   EIF3H_CHAGB Eukaryotic translation initiation...730.051     38.5     32     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
132A5A6I3    361   EIF3F_PANTR Eukaryotic translation initiation...600.093     37.7     33     62GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
133Q4R5B8    361   EIF3F_MACFA Eukaryotic translation initiation...600.095     37.7     33     62GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
134O00303    357   EIF3F_HUMAN Eukaryotic translation initiation...600.097     37.7     33     62GO:0005829; C:cytosol; TAS:Reactome.::GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003743; F:translation initiation factor activity; TAS:UniProtKB.
135Q9DCH4    361   EIF3F_MOUSE Eukaryotic translation initiation...600.11     37.4     33     62GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:UniProtKB.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
136Q0CCM5    345   EIF3F_ASPTN Eukaryotic translation initiation...1080.31     36.2     31     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
137O24412    308   PSD7_ARATH Probable 26S proteasome non-ATPase...1250.35     35.8     26     43GO:0005829; C:cytosol; IDA:TAIR.::GO:0000502; C:proteasome complex; IDA:TAIR.
GO:0009965; P:leaf morphogenesis; IMP:TAIR.
138A2QQ10    375   EIF3F_ASPNC Eukaryotic translation initiation...1080.39     35.8     31     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
139Q54C49    284   EIF3F_DICDI Eukaryotic translation initiation...1190.39     35.8     28     50GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:dictyBase.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0006446; P:regulation of translational initiation; ISS:dictyBase.
140A1D3E1    345   EIF3F_NEOFI Eukaryotic translation initiation...1080.56     35.4     31     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
141Q2UPM0    345   EIF3F_ASPOR Eukaryotic translation initiation...1080.57     35.4     31     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
142Q4WTH0    345   EIF3F_ASPFU Eukaryotic translation initiation...1080.61     35     31     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
143B0XQ55    345   EIF3F_ASPFC Eukaryotic translation initiation...1080.61     35     31     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
144A1CQH7    345   EIF3F_ASPCL Eukaryotic translation initiation...1080.63     35     31     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
145Q54WI8    325   PSD7_DICDI 26S proteasome non-ATPase regulato...960.76     35     24     45GO:0005838; C:proteasome regulatory particle; ISS:dictyBase.
GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:dictyBase.
146O04202    293   EIF3F_ARATH Eukaryotic translation initiation...650.88     34.7     29     54GO:0005829; C:cytosol; IDA:TAIR.::GO:0016020; C:membrane; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0009790; P:embryo development; IMP:TAIR.::GO:0009846; P:pollen germination; IMP:TAIR.
147Q04570    440   AROA_PASMU 3-phosphoshikimate 1-carboxyvinylt...931.1     34.7     23     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003866; F:3-phosphoshikimate 1-carboxyvinyltransferase activity; IEA:EC.
GO:0009073; P:aromatic amino acid family biosynthetic process; IEA:UniProtKB-KW.
148Q4PI88    301   EIF3F_USTMA Eukaryotic translation initiation...941.3     33.9     23     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
149Q54GD3    576   NPL4_DICDI Nuclear protein localization prote...1122.4     33.5     23     44GO:0005783; C:endoplasmic reticulum; ISS:dictyBase.::GO:0042175; C:nuclear outer membrane-endoplasmic reticulum membrane network; ISS:dictyBase.
GO:0030433; P:ER-associated protein catabolic process; ISS:dictyBase.
150B9W824    622   MDM34_CANDC Mitochondrial distribution and mo...1253.8     32.7     26     49GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
151A6VMU5    433   AROA_ACTSZ 3-phosphoshikimate 1-carboxyvinylt...904.3     32.7     26     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003866; F:3-phosphoshikimate 1-carboxyvinyltransferase activity; IEA:EC.
GO:0009073; P:aromatic amino acid family biosynthetic process; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 156 121 - 150
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::