Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YFL036W
Length:
1351
Number of sequences:
5887
Description:
YFL036W RPO41 SGDID:S000001858, Chr VI from 58782-62837, Genome Release 64-1-1, Verified ORF, "Mitochondrial RNA polymerase; single subunit enzyme similar to those of T3 and T7 bacteriophages; requires a specificity subunit encoded by MTF1 for promoter recognition"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q86VN1    386   VPS36_HUMAN Vacuolar protein-sorting-associat...1093.5     35.4     29     51GO:0005829; C:cytosol; TAS:Reactome.::GO:0005770; C:late endosome; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008289; F:lipid binding; IEA:UniProtKB-KW.
GO:0016044; P:cellular membrane organization; TAS:Reactome.::GO:0016197; P:endosome transport; TAS:Reactome.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
32P0C0A2    386   VPS36_RAT Vacuolar protein-sorting-associated...1093.6     35.4     28     51GO:0005770; C:late endosome; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008289; F:lipid binding; IEA:UniProtKB-KW.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
33Q3JBZ8    352   SYFA_NITOC Phenylalanine--tRNA ligase alpha s...834.8     35     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004826; F:phenylalanine-tRNA ligase activity; IEA:EC.::GO:0000049; F:tRNA binding; IEA:InterPro.
GO:0006432; P:phenylalanyl-tRNA aminoacylation; IEA:InterPro.
34Q91XD6    386   VPS36_MOUSE Vacuolar protein-sorting-associat...1105.2     35     28     51GO:0005770; C:late endosome; IDA:MGI.::GO:0005764; C:lysosome; IDA:MGI.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0008289; F:lipid binding; IEA:UniProtKB-KW.::GO:0043130; F:ubiquitin binding; IDA:MGI.
GO:0016197; P:endosome transport; IC:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
35O26780    311   ECR1_METTH Probable exosome complex RNA-bindi...1097.4     34.3     32     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0000178; C:exosome (RNase complex); IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
36Q1WUM9    120   RL20_LACS1 50S ribosomal protein L20 OS=Lacto...547.5     32.7     33     52GO:0005840; C:ribosome; IEA:UniProtKB-KW.
GO:0019843; F:rRNA binding; IEA:UniProtKB-KW.::GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0006412; P:translation; IEA:InterPro.
records
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