Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YFL009W
Length:
779
Number of sequences:
5887
Description:
YFL009W CDC4 SGDID:S000001885, Chr VI from 116145-118484, Genome Release 64-1-1, Verified ORF, "F-box protein required for G1/S and G2/M transition, associates with Skp1p and Cdc53p to form a complex, SCFCdc4, which acts as ubiquitin-protein ligase directing ubiquitination of the phosphorylated CDK inhibitor Sic1p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
841A4R7U3    446   CIAO1_MAGO7 Probable cytosolic iron-sulfur pr...1460.17     38.9     23     42
842Q5R7H5    546   DCA11_PONAB DDB1- and CUL4-associated factor ...2380.14     39.3     20     39GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
843Q7ZVA0    513   SMU1_DANRE WD40 repeat-containing protein SMU...1210.003     44.7     32     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
844O22469    424   MSI3_ARATH WD-40 repeat-containing protein MS...1232.4     35     23     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
845Q9W7I5    425   RBBP4_CHICK Histone-binding protein RBBP4 OS=...1920.49     37.4     25     44GO:0033186; C:CAF-1 complex; ISS:UniProtKB.::GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0006338; P:chromatin remodeling; ISS:HGNC.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
846A7TLU2    347   CIAO1_VANPO Probable cytosolic iron-sulfur pr...1005.7     33.9     22     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
847Q6P3H7    424   RBBP4_DANRE Histone-binding protein RBBP4 OS=...1920.006     43.5     26     45GO:0033186; C:CAF-1 complex; ISS:UniProtKB.::GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0006338; P:chromatin remodeling; ISS:HGNC.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
848Q5M9G8    549   DCA11_RAT DDB1- and CUL4-associated factor 11...2490.021     42     21     40GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
849A6H603    1563   NWD1_MOUSE NACHT and WD repeat domain-contain...1311.2     36.6     24     39
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
850P90794    571   DCA11_CAEEL DDB1- and CUL4-associated factor ...1800.073     40     22     43GO:0005634; C:nucleus; IDA:WormBase.
GO:0008134; F:transcription factor binding; IPI:WormBase.
GO:0008340; P:determination of adult lifespan; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0040018; P:positive regulation of multicellular organism growth; IMP:WormBase.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:WormBase.::GO:0080135; P:regulation of cellular response to stress; IMP:WormBase.
851P49178    380   GBB_MAIZE Guanine nucleotide-binding protein ...2410.47     37.4     22     37
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
852P55735    322   SEC13_HUMAN Protein SEC13 homolog OS=Homo sap...1090.0004     47     28     49GO:0005829; C:cytosol; TAS:Reactome.::GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome.::GO:0012507; C:ER to Golgi transport vesicle membrane; TAS:Reactome.::GO:0031080; C:Nup107-160 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0002474; P:antigen processing and presentation of peptide antigen via MHC class I; TAS:Reactome.::GO:0048208; P:COPII vesicle coating; TAS:Reactome.::GO:0006886; P:intracellular protein transport; NAS:UniProtKB.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0043687; P:post-translational protein modification; TAS:Reactome.::GO:0018279; P:protein N-linked glycosylation via asparagine; TAS:Reactome.
853Q5M7K4    425   RBBP4_XENTR Histone-binding protein RBBP4 OS=...1710.6     37     26     46GO:0033186; C:CAF-1 complex; ISS:UniProtKB.::GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
854Q60972    425   RBBP4_MOUSE Histone-binding protein RBBP4 OS=...1920.5     37.4     25     44GO:0033186; C:CAF-1 complex; ISS:UniProtKB.::GO:0035098; C:ESC/E(Z) complex; IDA:UniProtKB.::GO:0016581; C:NuRD complex; IDA:MGI.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0006338; P:chromatin remodeling; TAS:MGI.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
855Q09028    425   RBBP4_HUMAN Histone-binding protein RBBP4 OS=...1920.5     37.4     25     44GO:0033186; C:CAF-1 complex; IDA:UniProtKB.::GO:0035098; C:ESC/E(Z) complex; IDA:UniProtKB.::GO:0016581; C:NuRD complex; IDA:UniProtKB.::GO:0016589; C:NURF complex; IDA:UniProtKB.::GO:0016580; C:Sin3 complex; NAS:BHF-UCL.
GO:0042393; F:histone binding; NAS:BHF-UCL.::GO:0042826; F:histone deacetylase binding; IPI:BHF-UCL.
GO:0034080; P:CenH3-containing nucleosome assembly at centromere; TAS:Reactome.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0000278; P:mitotic cell cycle; TAS:Reactome.::GO:0008285; P:negative regulation of cell proliferation; TAS:ProtInc.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
856Q3MHL3    425   RBBP4_BOVIN Histone-binding protein RBBP4 OS=...1920.5     37.4     25     44GO:0033186; C:CAF-1 complex; ISS:UniProtKB.::GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
857P90917    412   RBA1_CAEEL Probable histone-binding protein r...1400.46     37.4     24     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:WormBase.
GO:0001708; P:cell fate specification; IMP:WormBase.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0001703; P:gastrulation with mouth forming first; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016246; P:RNA interference; IMP:WormBase.::GO:0045138; P:tail tip morphogenesis; IMP:WormBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
858Q9ERG2    796   STRN3_MOUSE Striatin-3 OS=Mus musculus (Mouse...1000.072     40.4     25     45
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
859Q9UT85    507   YIPC_SCHPO Uncharacterized WD repeat-containi...3041.2     36.2     23     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0034657; C:GID complex; ISS:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0045721; P:negative regulation of gluconeogenesis; ISS:PomBase.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:PomBase.
860Q1DJF7    465   YTM1_COCIM Ribosome biogenesis protein YTM1 O...2670.0005     47     26     36GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
861Q5RF92    425   RBBP4_PONAB Histone-binding protein RBBP4 OS=...1920.49     37.4     25     44GO:0033186; C:CAF-1 complex; ISS:UniProtKB.::GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
862Q5E9I8    546   DCA11_BOVIN DDB1- and CUL4-associated factor ...2380.14     39.3     20     39
863Q9VAT2    621   DCA10_DROME DDB1- and CUL4-associated factor ...660.57     37.4     30     55
864Q6INH0    425   RBP4B_XENLA Histone-binding protein RBBP4-B O...1710.56     37     26     46GO:0033186; C:CAF-1 complex; ISS:UniProtKB.::GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0006338; P:chromatin remodeling; ISS:HGNC.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
865Q80ZK9    677   WDTC1_MOUSE WD and tetratricopeptide repeats ...1920.017     42.4     25     43GO:0005829; C:cytosol; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0004857; F:enzyme inhibitor activity; IDA:MGI.::GO:0042393; F:histone binding; IPI:MGI.::GO:0042826; F:histone deacetylase binding; IPI:MGI.
GO:0055082; P:cellular chemical homeostasis; IMP:MGI.::GO:0032869; P:cellular response to insulin stimulus; IMP:MGI.::GO:0006006; P:glucose metabolic process; IMP:MGI.::GO:0001701; P:in utero embryonic development; IMP:MGI.::GO:0035264; P:multicellular organism growth; IMP:MGI.::GO:0045717; P:negative regulation of fatty acid biosynthetic process; IDA:MGI.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0008361; P:regulation of cell size; IMP:MGI.
866Q8N5D0    677   WDTC1_HUMAN WD and tetratricopeptide repeats ...1920.013     42.7     25     43GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA.
GO:0005515; F:protein binding; IPI:DFLAT.
867O93377    425   RBP4A_XENLA Histone-binding protein RBBP4-A O...1710.69     37     26     46GO:0033186; C:CAF-1 complex; ISS:UniProtKB.::GO:0035098; C:ESC/E(Z) complex; ISS:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
868O94244    430   HAT2_SCHPO Histone acetyltransferase type B s...1190.007     43.1     29     46GO:0000778; C:condensed nuclear chromosome kinetochore; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0031511; C:Mis6-Sim4 complex; TAS:PomBase.::GO:0000790; C:nuclear chromatin; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0034080; P:CenH3-containing nucleosome assembly at centromere; TAS:PomBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0016575; P:histone deacetylation; IMP:PomBase.::GO:0051382; P:kinetochore assembly; TAS:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0070317; P:negative regulation of G0 to G1 transition; IMP:PomBase.::GO:0034501; P:protein localization to kinetochore; IGI:PomBase.::GO:0031066; P:regulation of histone deacetylation at centromere; IMP:PomBase.
869Q3UDP0    460   WDR41_MOUSE WD repeat-containing protein 41 O...1333.6     34.7     23     44
870P97499    2629   TEP1_MOUSE Telomerase protein component 1 OS=...1430.41     38.1     22     45GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IMP:UniProtKB.
871Q8QFR2    1013   HIRA_XENLA Protein HIRA OS=Xenopus laevis (Af...1560.065     40.4     28     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
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