Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YFL009W
Length:
779
Number of sequences:
5887
Description:
YFL009W CDC4 SGDID:S000001885, Chr VI from 116145-118484, Genome Release 64-1-1, Verified ORF, "F-box protein required for G1/S and G2/M transition, associates with Skp1p and Cdc53p to form a complex, SCFCdc4, which acts as ubiquitin-protein ligase directing ubiquitination of the phosphorylated CDK inhibitor Sic1p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
571O88466    1888   ZF106_MOUSE Zinc finger protein 106 OS=Mus mu...1190.0002     48.5     24     52GO:0005829; C:cytosol; IDA:MGI.::GO:0005624; C:membrane fraction; IDA:MGI.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0001515; F:opioid peptide activity; IPI:MGI.::GO:0017124; F:SH3 domain binding; IDA:MGI.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0008286; P:insulin receptor signaling pathway; IDA:MGI.
572Q920M5    471   CORO6_MOUSE Coronin-6 OS=Mus musculus (Mouse)...2330.0000002     57.8     26     40GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.
573Q7ZXZ2    515   UTP15_XENLA U3 small nucleolar RNA-associated...2360.0000002     57.8     25     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
574P14197    478   AAC3_DICDI WD repeat-containing protein AAC3 ...2150.013     42.4     21     41
575Q5MNU5    1279   SCAP_PIG Sterol regulatory element-binding pr...1110.002     45.1     23     46GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0008203; P:cholesterol metabolic process; IEA:UniProtKB-KW.
576Q9C1X1    854   PWP2_SCHPO Periodic tryptophan protein 2 homo...3240.000001     55.8     21     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
577Q9FNZ1    443   C3H63_ARATH Zinc finger CCCH domain-containin...3000.0000003     57     23     40
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
578O35353    340   GBB4_RAT Guanine nucleotide-binding protein s...2924.4     34.3     21     38
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
579O94967    919   WDR47_HUMAN WD repeat-containing protein 47 O...1241.3     36.2     24     44
580Q9QXL1    1668   KI21B_MOUSE Kinesin-like protein KIF21B OS=Mu...1186.7     33.9     25     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030425; C:dendrite; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0007018; P:microtubule-based movement; IEA:InterPro.
581O22785    525   PR19B_ARATH Pre-mRNA-processing factor 19 hom...1081.6     35.8     26     44GO:0005618; C:cell wall; IDA:TAIR.::GO:0009507; C:chloroplast; IDA:TAIR.::GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0042742; P:defense response to bacterium; IGI:TAIR.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
582Q9XSC3    912   WDR44_BOVIN WD repeat-containing protein 44 O...1040.002     45.8     26     46GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
583Q7RZF5    304   SEC13_NEUCR Protein transport protein sec-13 ...1085.2     33.9     27     41GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0012507; C:ER to Golgi transport vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005643; C:nuclear pore; IEA:UniProtKB-SubCell.
GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
584Q756D0    445   YTM1_ASHGO Ribosome biogenesis protein YTM1 O...1200.45     37.4     29     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
585Q10051    492   PRP19_CAEEL Pre-mRNA-processing factor 19 hom...833.5     34.7     30     48GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0040002; P:collagen and cuticulin-based cuticle development; IMP:WormBase.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
586Q5BJ90    423   WDR12_XENTR Ribosome biogenesis protein wdr12...803.6     34.7     29     54GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
587Q6QEF8    472   CORO6_HUMAN Coronin-6 OS=Homo sapiens (Human)...2330.0000004     57     24     41GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.
588Q28DW0    333   CIAO1_XENTR Probable cytosolic iron-sulfur pr...2170.0000004     56.2     28     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
589Q6NLV4    647   FY_ARATH Flowering time control protein FY OS...1210.053     40.8     26     50GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IGI:TAIR.::GO:0009909; P:regulation of flower development; IMP:TAIR.
590P29387    340   GBB4_MOUSE Guanine nucleotide-binding protein...1286     33.9     24     44
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:MGI.
591Q6DH44    315   WDR83_DANRE WD repeat domain-containing prote...2630.00002     51.2     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
592Q94BR4    523   PR19A_ARATH Pre-mRNA-processing factor 19 hom...1735     34.3     23     39GO:0005730; C:nucleolus; IDA:TAIR.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0042742; P:defense response to bacterium; IGI:TAIR.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0046686; P:response to cadmium ion; IEP:TAIR.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
593Q6CP71    452   PFS2_KLULA Polyadenylation factor subunit 2 O...1440.19     38.5     24     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
594Q5AZX0    567   PFS2_EMENI Polyadenylation factor subunit 2 O...1523.1     35     20     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
595Q94AD8    539   FBW3_ARATH F-box/WD-40 repeat-containing prot...3001.5     35.8     20     39
GO:0016036; P:cellular response to phosphate starvation; IMP:TAIR.
596Q6FLI3    579   CAF4_CANGA CCR4-associated factor 4 homolog O...1420.2     38.9     25     42GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
597Q54D08    304   LST8_DICDI Protein LST8 homolog OS=Dictyostel...2181.9     35     22     39GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0031932; C:TORC2 complex; IPI:dictyBase.
GO:0007190; P:activation of adenylate cyclase activity; IMP:dictyBase.::GO:0032148; P:activation of protein kinase B activity; IMP:dictyBase.::GO:0031152; P:aggregation involved in sorocarp development; IMP:dictyBase.::GO:0043327; P:chemotaxis to cAMP; IMP:dictyBase.::GO:0030838; P:positive regulation of actin filament polymerization; IMP:dictyBase.::GO:0043520; P:regulation of myosin II filament assembly; IMP:dictyBase.
598Q920J3    472   CORO6_RAT Coronin-6 OS=Rattus norvegicus (Rat...2330.0000007     56.2     25     39GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0030036; P:actin cytoskeleton organization; IBA:RefGenome.
599Q8TED0    518   UTP15_HUMAN U3 small nucleolar RNA-associated...1790.005     43.9     20     42GO:0005737; C:cytoplasm; IDA:LIFEdb.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
600Q75AV4    449   PFS2_ASHGO Polyadenylation factor subunit 2 O...1700.86     36.6     22     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
601Q9EPV5    1249   APAF_RAT Apoptotic protease-activating factor...3734.8     34.7     20     34GO:0043293; C:apoptosome; IDA:RGD.
GO:0043531; F:ADP binding; IEA:InterPro.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0031072; F:heat shock protein binding; IPI:RGD.::GO:0042802; F:identical protein binding; IDA:RGD.
GO:0007568; P:aging; IEP:RGD.::GO:0007420; P:brain development; IEP:RGD.::GO:0010659; P:cardiac muscle cell apoptotic process; IMP:RGD.::GO:0030154; P:cell differentiation; IEP:RGD.::GO:0071560; P:cellular response to transforming growth factor beta stimulus; IDA:RGD.::GO:0006952; P:defense response; IEA:InterPro.::GO:0034349; P:glial cell apoptotic process; IEP:RGD.::GO:0006917; P:induction of apoptosis; IDA:RGD.::GO:0051260; P:protein homooligomerization; IDA:RGD.::GO:0001666; P:response to hypoxia; IEP:RGD.::GO:0007584; P:response to nutrient; IEP:RGD.
records
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