Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YFL009W
Length:
779
Number of sequences:
5887
Description:
YFL009W CDC4 SGDID:S000001885, Chr VI from 116145-118484, Genome Release 64-1-1, Verified ORF, "F-box protein required for G1/S and G2/M transition, associates with Skp1p and Cdc53p to form a complex, SCFCdc4, which acts as ubiquitin-protein ligase directing ubiquitination of the phosphorylated CDK inhibitor Sic1p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
481Q9H2Y7    1883   ZF106_HUMAN Zinc finger protein 106 homolog O...1190.0005     47.4     24     52GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0008270; F:zinc ion binding; IEA:InterPro.
482B4KTK4    331   CIAO1_DROMO Probable cytosolic iron-sulfur pr...2340.000000008     61.6     25     44
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
483C4YPI7    486   LIS1_CANAW Nuclear distribution protein PAC1 ...1353.6     34.7     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
484Q5A7Q6    486   LIS1_CANAL Nuclear distribution protein PAC1 ...1353.6     34.7     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
485Q05583    330   CIAO1_YEAST Cytosolic iron-sulfur protein ass...620.19     38.5     37     52GO:0005829; C:cytosol; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0016226; P:iron-sulfur cluster assembly; IMP:SGD.::GO:0000055; P:ribosomal large subunit export from nucleus; IMP:SGD.::GO:0002098; P:tRNA wobble uridine modification; IMP:SGD.
486Q5R1S9    566   CAF1B_CHICK Chromatin assembly factor 1 subun...1940.000000009     62.4     25     44GO:0033186; C:CAF-1 complex; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0031497; P:chromatin assembly; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
487Q08E38    504   PRP19_BOVIN Pre-mRNA-processing factor 19 OS=...1240.008     43.1     23     48GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
488O00628    323   PEX7_HUMAN Peroxisomal targeting signal 2 rec...2200.0004     47     24     44GO:0005777; C:peroxisome; IDA:UniProtKB.
GO:0005053; F:peroxisome matrix targeting signal-2 binding; IDA:UniProtKB.
GO:0008611; P:ether lipid biosynthetic process; IMP:UniProtKB.::GO:0016558; P:protein import into peroxisome matrix; IMP:UniProtKB.
489Q9UMS4    504   PRP19_HUMAN Pre-mRNA-processing factor 19 OS=...1240.008     43.1     23     48GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0016607; C:nuclear speck; IDA:BHF-UCL.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:BHF-UCL.::GO:0034450; F:ubiquitin-ubiquitin ligase activity; IDA:MGI.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0000209; P:protein polyubiquitination; IDA:MGI.::GO:0000245; P:spliceosomal complex assembly; IMP:BHF-UCL.
490Q9UT57    608   CFD1_SCHPO Probable cytosolic Fe-S cluster as...3700.00000001     62.4     24     41GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; ISS:PomBase.::GO:0016887; F:ATPase activity; ISS:PomBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0016226; P:iron-sulfur cluster assembly; ISS:PomBase.
491P61480    423   WDR12_RAT Ribosome biogenesis protein WDR12 O...1194.7     34.3     25     47GO:0005654; C:nucleoplasm; ISS:UniProtKB.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.::GO:0030687; C:preribosome, large subunit precursor; ISS:UniProtKB.
GO:0008283; P:cell proliferation; ISS:UniProtKB.::GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
492B9WD30    489   LIS1_CANDC Nuclear distribution protein PAC1 ...3150.0000002     58.2     23     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
493Q5ZMA2    505   PRP19_CHICK Pre-mRNA-processing factor 19 OS=...1250.004     43.9     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
494Q9C270    899   PWP2_NEUCR Periodic tryptophan protein 2 homo...1140.0002     48.5     33     48
495P29829    346   GBB2_DROME Guanine nucleotide-binding protein...3240.28     38.1     20     37GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005834; C:heterotrimeric G-protein complex; IDA:FlyBase.::GO:0016028; C:rhabdomere; IDA:FlyBase.
GO:0003924; F:GTPase activity; IMP:FlyBase.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007202; P:activation of phospholipase C activity; IMP:FlyBase.::GO:0016059; P:deactivation of rhodopsin mediated signaling; IMP:FlyBase.::GO:0016056; P:rhodopsin mediated signaling pathway; IMP:FlyBase.
496Q6FKK3    457   YTM1_CANGA Ribosome biogenesis protein YTM1 O...2000.14     39.3     25     41GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
497Q9XS70    486   COR1B_RABIT Coronin-1B OS=Oryctolagus cunicul...2890.00000001     61.6     26     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
498B4HRQ6    335   CIAO1_DROSE Probable cytosolic iron-sulfur pr...2410.00000009     58.5     24     42
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
499Q5ZKU8    369   PK1IP_CHICK p21-activated protein kinase-inte...2410.00000002     61.2     22     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0009968; P:negative regulation of signal transduction; IEA:UniProtKB-KW.
500B4JW81    331   CIAO1_DROGR Probable cytosolic iron-sulfur pr...2720.00001     51.6     22     40
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
501Q17GR9    337   CIAO1_AEDAE Probable cytosolic iron-sulfur pr...2180.00000002     60.8     27     46
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
502P93107    606   PF20_CHLRE Flagellar WD repeat-containing pro...643.7     34.7     27     47GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0019861; C:flagellum; IEA:UniProtKB-SubCell.
503Q54N86    1178   FBXAL_DICDI F-box/WD repeat-containing protei...992.2     35.4     30     51
GO:0005488; F:binding; IEA:InterPro.
504C5DF48    457   LIS1_LACTC Nuclear distribution protein PAC1 ...2280.00000002     61.2     28     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
505B4P116    420   WDR12_DROYA Ribosome biogenesis protein WDR12...2410.066     40     22     39GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
506Q9JMJ4    504   PRP19_RAT Pre-mRNA-processing factor 19 OS=Ra...1240.008     43.1     23     48GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
507Q99KP6    504   PRP19_MOUSE Pre-mRNA-processing factor 19 OS=...1240.008     43.1     23     48GO:0005811; C:lipid particle; IDA:MGI.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0001833; P:inner cell mass cell proliferation; IMP:MGI.::GO:0008610; P:lipid biosynthetic process; IDA:MGI.::GO:0045665; P:negative regulation of neuron differentiation; IDA:MGI.::GO:0048711; P:positive regulation of astrocyte differentiation; IDA:MGI.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; IMP:MGI.
508O94620    340   CWF17_SCHPO Pre-mRNA-splicing factor cwf17 OS...2340.000006     52.8     24     43GO:0005681; C:spliceosomal complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IC:PomBase.
509B4LJT7    331   CIAO1_DROVI Probable cytosolic iron-sulfur pr...2720.000007     52.4     22     41
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
510A6ZYM0    330   CIAO1_YEAS7 Probable cytosolic iron-sulfur pr...620.18     38.5     37     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
511Q5XGE2    515   UTP15_XENTR U3 small nucleolar RNA-associated...2360.00000002     60.8     25     42GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
records
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