Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YFL008W
Length:
1225
Number of sequences:
5887
Description:
YFL008W SMC1 SGDID:S000001886, Chr VI from 119429-123106, Genome Release 64-1-1, Verified ORF, "Subunit of the multiprotein cohesin complex, essential protein involved in chromosome segregation and in double-strand DNA break repair; SMC chromosomal ATPase family member, binds DNA with a preference for DNA with secondary structure"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
241B2INP4    365   RECF_STRPS DNA replication and repair protein...617.6     34.3     36     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
242Q3SVV2    200   CCMA_NITWN Cytochrome c biogenesis ATP-bindin...1077.7     33.5     29     45GO:0030288; C:outer membrane-bounded periplasmic space; IEA:InterPro.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0015439; F:heme-transporting ATPase activity; IEA:EC.
GO:0017004; P:cytochrome complex assembly; IEA:UniProtKB-KW.
243Q90339    1935   MYSS_CYPCA Myosin heavy chain, fast skeletal ...1298.9     34.3     29     53GO:0030016; C:myofibril; IEA:UniProtKB-SubCell.::GO:0032982; C:myosin filament; IEA:UniProtKB-KW.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003774; F:motor activity; IEA:InterPro.
244Q4R630    642   NDC80_MACFA Kinetochore protein NDC80 homolog...1018.9     34.3     27     56GO:0000777; C:condensed chromosome kinetochore; ISS:UniProtKB.::GO:0031262; C:Ndc80 complex; ISS:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; ISS:UniProtKB.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007052; P:mitotic spindle organization; ISS:UniProtKB.
245Q8U4L3    260   Y068_PYRFU Putative ABC transporter ATP-bindi...1509     33.5     26     43GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.
GO:0006810; P:transport; IEA:UniProtKB-KW.
246Q66GS9    1140   CP135_HUMAN Centrosomal protein of 135 kDa OS...1539.4     34.3     27     49GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.
GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.
GO:0007099; P:centriole replication; IMP:UniProtKB.::GO:0010457; P:centriole-centriole cohesion; IMP:UniProtKB.::GO:0000086; P:G2/M transition of mitotic cell cycle; TAS:Reactome.
247O14777    642   NDC80_HUMAN Kinetochore protein NDC80 homolog...1019.6     33.9     27     56GO:0000942; C:condensed nuclear chromosome outer kinetochore; IDA:BHF-UCL.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0031262; C:Ndc80 complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0008608; P:attachment of spindle microtubules to kinetochore; IMP:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000132; P:establishment of mitotic spindle orientation; IMP:UniProtKB.::GO:0000236; P:mitotic prometaphase; TAS:Reactome.::GO:0000070; P:mitotic sister chromatid segregation; TAS:ProtInc.::GO:0007052; P:mitotic spindle organization; IMP:UniProtKB.::GO:0048015; P:phosphatidylinositol-mediated signaling; NAS:UniProtKB.
248B3W6Q9    371   RECF_LACCB DNA replication and repair protein...639.7     33.9     37     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
249Q6AHN3    385   RECF_LEIXX DNA replication and repair protein...589.7     33.9     29     64GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
250O96759    611   ADAS_DICDI Alkyldihydroxyacetonephosphate syn...20110     33.9     22     40GO:0005777; C:peroxisome; ISS:dictyBase.
GO:0043178; F:alcohol binding; IDA:dictyBase.::GO:0008609; F:alkylglycerone-phosphate synthase activity; IDA:dictyBase.::GO:0050660; F:flavin adenine dinucleotide binding; IDA:dictyBase.::GO:0008762; F:UDP-N-acetylmuramate dehydrogenase activity; IEA:InterPro.
GO:0008611; P:ether lipid biosynthetic process; IDA:dictyBase.
records
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