Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YFL008W
Length:
1225
Number of sequences:
5887
Description:
YFL008W SMC1 SGDID:S000001886, Chr VI from 119429-123106, Genome Release 64-1-1, Verified ORF, "Subunit of the multiprotein cohesin complex, essential protein involved in chromosome segregation and in double-strand DNA break repair; SMC chromosomal ATPase family member, binds DNA with a preference for DNA with secondary structure"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
211C0MGR5    369   RECF_STRS7 DNA replication and repair protein...614.5     35     34     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
212C0MBG1    369   RECF_STRE4 DNA replication and repair protein...614.5     35     34     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
213Q15025    636   TNIP1_HUMAN TNFAIP3-interacting protein 1 OS=...1864.6     35     29     49GO:0005737; C:cytoplasm; IDA:HPA.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006952; P:defense response; TAS:ProtInc.::GO:0009101; P:glycoprotein biosynthetic process; IDA:UniProtKB.::GO:0045071; P:negative regulation of viral genome replication; TAS:UniProtKB.::GO:0006412; P:translation; TAS:ProtInc.
214A5D8V6    355   VP37C_HUMAN Vacuolar protein sorting-associat...1194.7     34.7     25     44GO:0031902; C:late endosome membrane; IEA:UniProtKB-SubCell.
GO:0016044; P:cellular membrane organization; TAS:Reactome.::GO:0046788; P:egress of virus within host cell; TAS:Reactome.::GO:0016197; P:endosome transport; TAS:Reactome.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
215Q0HVP4    404   ISCS_SHESR Cysteine desulfurase OS=Shewanella...1134.8     35     24     49
GO:0031071; F:cysteine desulfurase activity; IEA:EC.::GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
GO:0006534; P:cysteine metabolic process; IEA:InterPro.
216A0KXJ0    404   ISCS_SHESA Cysteine desulfurase OS=Shewanella...1134.8     35     24     49
GO:0031071; F:cysteine desulfurase activity; IEA:EC.::GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
GO:0006534; P:cysteine metabolic process; IEA:InterPro.
217B8H7D1    402   RECF_ARTCA DNA replication and repair protein...544.8     34.7     35     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
218Q8CQK5    371   RECF_STAES DNA replication and repair protein...584.9     34.7     34     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
219Q5HK02    371   RECF_STAEQ DNA replication and repair protein...585.1     34.7     34     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
220B4U113    369   RECF_STREM DNA replication and repair protein...615.1     34.7     33     56GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
221P44733    450   RMUC_HAEIN DNA recombination protein rmuC hom...1185.2     34.7     30     55
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.
222Q5HC57    228   LOLD_EHRRW Lipoprotein-releasing system ATP-b...485.2     34.3     40     60GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0042954; F:lipoprotein transporter activity; IEA:InterPro.
223Q5FFC0    228   LOLD_EHRRG Lipoprotein-releasing system ATP-b...485.2     34.3     40     60GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; IEA:InterPro.::GO:0042954; F:lipoprotein transporter activity; IEA:InterPro.
224Q8R105    352   VP37C_MOUSE Vacuolar protein sorting-associat...1565.3     34.7     22     37GO:0031902; C:late endosome membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
225O88998    485   NOE1_MOUSE Noelin OS=Mus musculus (Mouse). GN...1045.4     34.7     26     53GO:0005788; C:endoplasmic reticulum lumen; IEA:UniProtKB-SubCell.::GO:0005615; C:extracellular space; IDA:MGI.
GO:0005515; F:protein binding; IPI:MGI.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0051259; P:protein oligomerization; IDA:MGI.
226A7Z0C6    370   RECF_BACA2 DNA replication and repair protein...545.5     34.7     39     65GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
227Q0HJF4    404   ISCS_SHESM Cysteine desulfurase OS=Shewanella...1135.5     34.7     24     49
GO:0031071; F:cysteine desulfurase activity; IEA:EC.::GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
GO:0006534; P:cysteine metabolic process; IEA:InterPro.
228A8AU71    361   RECF_STRGC DNA replication and repair protein...645.8     34.7     33     58GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
229Q99784    485   NOE1_HUMAN Noelin OS=Homo sapiens (Human). GN...1045.9     34.7     27     52GO:0005788; C:endoplasmic reticulum lumen; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007399; P:nervous system development; TAS:ProtInc.
230Q0I0U6    360   RECF_SHESR DNA replication and repair protein...1456     34.3     30     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
231Q5R9T2    355   VP37C_PONAB Vacuolar protein sorting-associat...1026.1     34.3     27     46GO:0031902; C:late endosome membrane; IEA:UniProtKB-SubCell.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
232P05651    370   RECF_BACSU DNA replication and repair protein...546.2     34.3     39     65GO:0043590; C:bacterial nucleoid; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006302; P:double-strand break repair; IMP:UniProtKB.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
233Q8K4Q8    742   COL12_MOUSE Collectin-12 OS=Mus musculus (Mou...2526.6     34.7     24     47GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0030169; F:low-density lipoprotein particle binding; ISS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008329; F:pattern recognition receptor activity; ISS:UniProtKB.
GO:0006955; P:immune response; IDA:MGI.::GO:0006910; P:phagocytosis, recognition; ISS:UniProtKB.
234Q0HPD2    360   RECF_SHESM DNA replication and repair protein...1456.9     34.3     30     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
235Q6CTI0    830   EIS1_KLULA Eisosome protein 1 OS=1267 / NRRL ...756.9     34.7     32     55GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
236Q62609    485   NOE1_RAT Noelin OS=Rattus norvegicus (Rat). G...1047     34.3     27     51GO:0005788; C:endoplasmic reticulum lumen; IEA:UniProtKB-SubCell.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
237Q7VMW3    360   RECF_HAEDU DNA replication and repair protein...2037     34.3     24     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
238A0LQR9    371   RECF_ACIC1 DNA replication and repair protein...717.3     34.3     31     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
239A0KR37    360   RECF_SHESA DNA replication and repair protein...1457.4     34.3     30     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
240Q8C147    2100   DOCK8_MOUSE Dedicator of cytokinesis protein ...757.5     34.7     27     53
GO:0005525; F:GTP binding; IEA:InterPro.::GO:0051020; F:GTPase binding; IEA:InterPro.::GO:0005085; F:guanyl-nucleotide exchange factor activity; IEA:UniProtKB-KW.
241B2INP4    365   RECF_STRPS DNA replication and repair protein...617.6     34.3     36     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003697; F:single-stranded DNA binding; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
records
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